RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 NDC80O14777 642 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 GIPC1O14908 333 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 CASC3O15234 703 aaKnown RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 SIGLEC6O43699 453 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 PCDHGA12O60330 932 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 DFNA5O60443 496 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 SNX2O60749 519 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 FAM153BP0C7A2 387 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 ZNF883P0CG24 379 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 ATP1B2P14415 290 aaPredicted RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 ZNF7P17097 686 aaPredicted RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 PAMP19021 973 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 PMLP29590 882 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 ACTR1BP42025 376 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 SLC1A2P43004 574 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 MAGEA4P43358 317 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 GPX6P59796 221 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 ACTR1AP61163 376 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 CAV1Q03135 178 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 THOC5Q13769 683 aaKnown RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 GTF2H3Q13889 308 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 NFE2L1Q14494 772 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 NAA30Q147X3 362 aaPredicted RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 SEPT7Q16181 437 aaKnown RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 LONRF1Q17RB8 773 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 INSCQ1MX18 579 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 FAM153CQ494X1 144 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 SPANXN3Q5MJ09 141 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 STEAP4Q687X5 459 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 ZNF470Q6ECI4 717 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 XKR5Q6UX68 686 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 DBX2Q6ZNG2 339 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 LRRTM4Q86VH4 590 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 KCNMB4Q86W47 210 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 CILP2Q8IUL8 1156 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 NAXDQ8IW45 347 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 KRT222Q8N1A0 295 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 ASCC3Q8N3C0 2202 aaKnown RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 FAM46DQ8NEK8 389 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 DEFB124Q8NES8 71 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 LKAAEAR1Q8TD35 194 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 NETO1Q8TDF5 533 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 GPBAR1Q8TDU6 330 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 RHBDD1Q8TEB9 315 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 PYROXD1Q8WU10 500 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.16□□□□□ -1.1
SF1-218ENST00000489544 FAM136AQ96C01 138 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 LRRC39Q96DD0 335 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 CERS2Q96G23 380 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 SGSM3Q96HU1 749 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 OSGEPL1Q9H4B0 414 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 ANKZF1Q9H8Y5 726 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 PPANQ9NQ55 473 aaKnown RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 PRDM8Q9NQV8 689 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 SMYD2Q9NRG4 433 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 KLC4Q9NSK0 619 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 TRNAU1APQ9NX07 287 aaKnown RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 TAAR2Q9P1P5 351 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 GULP1Q9UBP9 304 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 TBC1D29Q9UFV1 150 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 CDV3Q9UKY7 258 aaKnown RBP8.16□□□□□ -1.1
SF1-218ENST00000489544 DOLKQ9UPQ8 538 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 CRYL1Q9Y2S2 319 aa8.16□□□□□ -1.1
SF1-218ENST00000489544 LY6G6EA0A0G2JKS1 128 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 PRAMEF33A0A0G2JMD5 474 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 DCDC2BA2VCK2 349 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 CXorf49A8MYA2 514 aaPredicted RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 B4DGG1 531 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 LMO7DNF2Z398 122 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 SLC30A4O14863 429 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 TM4SF5O14894 197 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 KMOO15229 486 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 EIF3HO15372 352 aaKnown RBP eCLIP8.15□□□□□ -1.16e-9■□□□□ 8.2
SF1-218ENST00000489544 YKT6O15498 198 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 FOXD2O60548 495 aaPredicted RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 CBFA2T3O75081 653 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 NDUFS3O75489 264 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 HAUS5O94927 633 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 TTC4O95801 387 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 S1PR4O95977 384 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 ANXA6P08133 673 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 RALBP11234 206 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 RPL10P27635 214 aaKnown RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 GABRB3P28472 473 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 FMO4P31512 558 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 PRLHRP49683 370 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 PGGT1BP53609 377 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 LIMK1P53667 647 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 CSE1LP55060 971 aaKnown RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 EIF3BP55884 814 aaKnown RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 MAZP56270 477 aaKnown RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 ILF3Q12906 894 aaKnown RBP eCLIP8.15□□□□□ -1.1
SF1-218ENST00000489544 CBLBQ13191 982 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 DNAJC3Q13217 504 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 ITIH4Q14624 930 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 SUZ12Q15022 739 aaKnown RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 EFTUD2Q15029 972 aaKnown RBP eCLIP8.15□□□□□ -1.11e-9■■□□□ 13.2
SF1-218ENST00000489544 BRD3Q15059 726 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 ELOCQ15369 112 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 KYNUQ16719 465 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms