RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 WASH2PQ6VEQ5 465 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 FAM92BQ6ZTR7 304 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 ASB18Q6ZVZ8 466 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 TMC3Q7Z5M5 1100 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 TRAPPC5Q8IUR0 188 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 KLHL6Q8WZ60 621 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 SEC14L1Q92503 715 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 RSC1A1Q92681 617 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 IMP4Q96G21 291 aaKnown RBP9.2□□□□□ -0.94
SNX17-207ENST00000489402 AGAP3Q96P47 875 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 TRIB3Q96RU7 358 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 ANP32EQ9BTT0 268 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 CEP41Q9BYV8 373 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 ZCCHC2Q9C0B9 1178 aaKnown RBP9.2□□□□□ -0.94
SNX17-207ENST00000489402 XPO4Q9C0E2 1151 aaKnown RBP9.2□□□□□ -0.94
SNX17-207ENST00000489402 SLC25A51Q9H1U9 297 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 SLC40A1Q9NP59 571 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 WASH6PQ9NQA3 447 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 EPHA6Q9UF33 1036 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 PADI1Q9ULC6 663 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 PLAAQ9Y263 795 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 MAN2B2Q9Y2E5 1009 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 PCDHGA6Q9Y5G7 932 aa9.2□□□□□ -0.94
SNX17-207ENST00000489402 PIPSLA2A3N6 862 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 CLEC18AA5D8T8 446 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 GOLGA6L3A6NEY3 463 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 OR52A4PA6NMU1 304 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 ZNF487B1APH4 448 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 C21orf140B9A014 251 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 KIF1CO43896 1103 aaKnown RBP9.19□□□□□ -0.94
SNX17-207ENST00000489402 KCNJ13O60928 360 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 RECKO95980 971 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 BRAFP15056 766 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 ZFXP17010 805 aaPredicted RBP9.19□□□□□ -0.94
SNX17-207ENST00000489402 BPIP17213 487 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 NELFEP18615 380 aaKnown RBP9.19□□□□□ -0.94
SNX17-207ENST00000489402 NR1D1P20393 614 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 PBX1P40424 430 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 ARL4DP49703 201 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 TUBB3Q13509 450 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 MESDQ14696 234 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 PLCL1Q15111 1095 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 CLEC18BQ6UXF7 455 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 VSIG1Q86XK7 387 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 ZNF547Q8IVP9 402 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 EFCAB3Q8N7B9 438 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 PLD5Q8N7P1 536 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 SIDT2Q8NBJ9 832 aaKnown RBP9.19□□□□□ -0.94
SNX17-207ENST00000489402 CLEC18CQ8NCF0 446 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 BRSK1Q8TDC3 778 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 RAPGEF5Q92565 580 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 UBXN4Q92575 508 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 MIB2Q96AX9 1013 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 VPS35Q96QK1 796 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 PACSIN1Q9BY11 444 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 RAB33BQ9H082 229 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 LHX9Q9NQ69 397 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 TRIM10Q9UDY6 481 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 RARRES3Q9UL19 164 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 NENFQ9UMX5 172 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 PTPN13Q12923 2485 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 NAV2Q8IVL1 2488 aa9.19□□□□□ -0.94
SNX17-207ENST00000489402 A0A0A6YYK5 440 aaPredicted RBP9.18□□□□□ -0.94
SNX17-207ENST00000489402 GOLGA6L19H0YKK7 550 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 MTSS1O43312 755 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 VPS4BO75351 444 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 PMPCBO75439 489 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 MT-CYBP00156 380 aaPredicted RBP9.18□□□□□ -0.94
SNX17-207ENST00000489402 KRT1P04264 644 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 GYPCP04921 128 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 FURINP09958 794 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 HMGCLP35914 325 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 CD97P48960 835 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 PDE1BQ01064 536 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 ACY1Q03154 408 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 TMEM115Q12893 351 aaPredicted RBP9.18□□□□□ -0.94
SNX17-207ENST00000489402 SLC18A3Q16572 532 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 ATP13A5Q4VNC0 1218 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 KHDC1Q4VXA5 237 aaKnown RBP9.18□□□□□ -0.94
SNX17-207ENST00000489402 ZDHHC20Q5W0Z9 365 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 SLC9A4Q6AI14 798 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 MICALCLQ6ZW33 695 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 LUZP1Q86V48 1076 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 AMZ2Q86W34 360 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 BPHLQ86WA6 291 aaPredicted RBP9.18□□□□□ -0.94
SNX17-207ENST00000489402 KMT5CQ86Y97 462 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 RFX6Q8HWS3 928 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 SPATA22Q8NHS9 363 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 CT55Q8WUE5 264 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 OLFM3Q96PB7 478 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 FCRL4Q96PJ5 515 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 DEF6Q9H4E7 631 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 TRABDQ9H4I3 376 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 ACTL8Q9H568 366 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 GLOD4Q9HC38 313 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 LRRC4CQ9HCJ2 640 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 BPIFA1Q9NP55 256 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.18□□□□□ -0.94
SNX17-207ENST00000489402 TLK1Q9UKI8 766 aa9.18□□□□□ -0.94
SNX17-207ENST00000489402 TMPRSS11EQ9UL52 423 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms