RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 FAM76AQ8TAV0 307 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 STAMBPL1Q96FJ0 436 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 SENP5Q96HI0 755 aaPredicted RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 LITAFQ99732 161 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 TMEM39BQ9GZU3 492 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 DIAPH3Q9NSV4 1193 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 OLA1Q9NTK5 396 aaKnown RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 ZNF624Q9P2J8 865 aaPredicted RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 TEX13DA0A0J9YY54 714 aaPredicted RBP3.42□□□□□ -1.86
RFC4-213ENST00000489028 OR2M5A3KFT3 312 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 ANKRD66B4E2M5 251 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 TMEM189-UBE2V1I3L0A0 370 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 J3QR06 171 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 PLK4O00444 970 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 EPB41L2O43491 1005 aaKnown RBP3.42□□□□□ -1.86
RFC4-213ENST00000489028 USO1O60763 962 aaKnown RBP3.42□□□□□ -1.86
RFC4-213ENST00000489028 GCNT3O95395 438 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 TSHBP01222 138 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 TFAP2AP05549 437 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 LIPFP07098 398 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 KRT19P08727 400 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 GABRB1P18505 474 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 MSH3P20585 1137 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 TNFAIP3P21580 790 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 CHMP24386 653 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 MSH2P43246 934 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 MMP15P51511 669 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 CTSCP53634 463 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 TFAP4Q01664 338 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 UBE2V1Q13404 147 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 PCGF3Q3KNV8 242 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 ARHGAP11AQ6P4F7 1023 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 SLC27A1Q6PCB7 646 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 KLHL35Q6PF15 583 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 ZNF534Q76KX8 674 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 LONP2Q86WA8 852 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 STPG4Q8N801 248 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 GSDMBQ8TAX9 411 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 TM9SF4Q92544 642 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 ABHD8Q96I13 439 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 DUX3Q96PT4 197 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 SEMA6AQ9H2E6 1030 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 PLK3Q9H4B4 646 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 SLC52A3Q9NQ40 469 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 SMC4Q9NTJ3 1288 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 PAG1Q9NWQ8 432 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 TRMT1Q9NXH9 659 aaKnown RBP3.42□□□□□ -1.86
RFC4-213ENST00000489028 RCC2Q9P258 522 aaKnown RBP3.42□□□□□ -1.86
RFC4-213ENST00000489028 ACAD8Q9UKU7 415 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 MTMR6Q9Y217 621 aa3.42□□□□□ -1.86
RFC4-213ENST00000489028 RUSC2Q8N2Y8 1516 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 A0A087X0M5 115 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 A0A1B0GX30 115 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 A0A1W2PR77 199 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 PGPEP1LA6NFU8 196 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 HMGB1P1B2RPK0 211 aaPredicted RBP3.41□□□□□ -1.86
RFC4-213ENST00000489028 SMIM1B2RUZ4 78 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 CIDEAO60543 219 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 HIST1H2ABP04908 130 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 TUBBP07437 444 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 INHBAP08476 426 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 ERVK-10P10266 1014 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 HIST1H2ADP20671 130 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 TM4SF1P30408 202 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 PPARGP37231 505 aaPredicted RBP3.41□□□□□ -1.86
RFC4-213ENST00000489028 MLLT10P55197 1068 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 HILS1P60008 231 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 TUBB4BP68371 445 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 SETQ01105 290 aaPredicted RBP3.41□□□□□ -1.86
RFC4-213ENST00000489028 TMEM30BQ3MIR4 351 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 ZSCAN23Q3MJ62 389 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 C14orf177Q52M58 125 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 ZC2HC1CQ53FD0 456 aaPredicted RBP3.41□□□□□ -1.86
RFC4-213ENST00000489028 SFMBT2Q5VUG0 894 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 PACS1Q6VY07 963 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 IKBIPQ70UQ0 350 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 HIST3H2AQ7L7L0 130 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 TRPT1Q86TN4 253 aaKnown RBP3.41□□□□□ -1.86
RFC4-213ENST00000489028 GALNT13Q8IUC8 556 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 APLFQ8IW19 511 aaPredicted RBP3.41□□□□□ -1.86
RFC4-213ENST00000489028 HACE1Q8IYU2 909 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 NGEFQ8N5V2 710 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 TRIM58Q8NG06 486 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 ZNF473Q8WTR7 871 aaKnown RBP3.41□□□□□ -1.86
RFC4-213ENST00000489028 USP6NLQ92738 828 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 MPP4Q96JB8 637 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 CMTM3Q96MX0 182 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 SRSF8Q9BRL6 282 aaKnown RBP3.41□□□□□ -1.86
RFC4-213ENST00000489028 UBA5Q9GZZ9 404 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 DNAJB4Q9UDY4 337 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 SMCHD1A6NHR9 2005 aa3.41□□□□□ -1.86
RFC4-213ENST00000489028 BLOC1S5-TXNDC5H3BN57 136 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 SLC22A2O15244 555 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 ZBTB43O43298 467 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 BUD23O43709 281 aaKnown RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 BMP10O95393 424 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 SCGB1D1O95968 90 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 NR3C1P04150 777 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 CD48P09326 243 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 ALDH4A1P30038 563 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms