RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SH3GL2Q99962 352 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 COL25A1Q9BXS0 654 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-242ENST00000488013 CENPHQ9H3R5 247 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 TMBIM4Q9HC24 238 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 LATS2Q9NRM7 1088 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 EURLQ9NYK6 297 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 TRMT6Q9UJA5 497 aaKnown RBP10.9□□□□□ -0.66
HDLBP-242ENST00000488013 TMPRSS11EQ9UL52 423 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 SLC39A10Q9ULF5 831 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 ANKRD6Q9Y2G4 727 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 OR1A2Q9Y585 309 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 VCANP13611 3396 aa10.9□□□□□ -0.66
HDLBP-242ENST00000488013 TRIM49D1C9J1S8 452 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 CHUKO15111 745 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 KMOO15229 486 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 BCAT2O15382 392 aaPredicted RBP10.89□□□□□ -0.67
HDLBP-242ENST00000488013 OR1I1O60431 355 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 PIAS1O75925 651 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 APOA4P06727 396 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 ENO3P13929 434 aaPredicted RBP10.89□□□□□ -0.67
HDLBP-242ENST00000488013 FDXRP22570 491 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 DGKAP23743 735 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 CD38P28907 300 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 DMWDQ09019 674 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 RPA4Q13156 261 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 PLK5Q496M5 336 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 TNFAIP8L3Q5GJ75 292 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 TMEM220Q6QAJ8 160 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 GCNT7Q6ZNI0 430 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 RAPH1Q70E73 1250 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 LRRTM4Q86VH4 590 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 GALNT13Q8IUC8 556 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 TRAPPC5Q8IUR0 188 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 RGL4Q8IZJ4 473 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 DCLK2Q8N568 766 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 NKAPQ8N5F7 415 aaKnown RBP10.89□□□□□ -0.67
HDLBP-242ENST00000488013 RASGEF1AQ8N9B8 481 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 CEP76Q8TAP6 659 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 INPP5DQ92835 1189 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 SCARF2Q96GP6 870 aaPredicted RBP10.89□□□□□ -0.67
HDLBP-242ENST00000488013 CCM2Q9BSQ5 444 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 OR2AG1Q9H205 316 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 SSU72Q9NP77 194 aaKnown RBP10.89□□□□□ -0.67
HDLBP-242ENST00000488013 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.89□□□□□ -0.67
HDLBP-242ENST00000488013 ATXN10Q9UBB4 475 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 TBK1Q9UHD2 729 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 DCDC2Q9UHG0 476 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 EIF2B4Q9UI10 523 aaKnown RBP10.89□□□□□ -0.67
HDLBP-242ENST00000488013 SMG5Q9UPR3 1016 aaKnown RBP10.89□□□□□ -0.67
HDLBP-242ENST00000488013 ACOT9Q9Y305 439 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 DHRS7Q9Y394 339 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 OAS3Q9Y6K5 1087 aaKnown RBP10.89□□□□□ -0.67
HDLBP-242ENST00000488013 DGKBQ9Y6T7 804 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 MIA3Q5JRA6 1907 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 ZDBF2Q9HCK1 2354 aa10.89□□□□□ -0.67
HDLBP-242ENST00000488013 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SPTY2D1-AS1A0A0U1RR47 76 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 A0A1B0GTW7 788 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 POM121BA6NF01 834 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 MGAT4DA6NG13 374 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 AGPSO00116 658 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 TLR4O00206 839 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 LIN7AO14910 233 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 VILLO15195 856 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 GRID2O43424 1007 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 LILRB5O75023 590 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SASH3O75995 380 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 RASGRP1O95267 797 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 TRIM16O95361 564 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 GSTA1P08263 222 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 PRSS56P0CW18 603 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 THEGLP0DJG4 465 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 BCKDHBP21953 392 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 MAGEA12P43365 314 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 C21orf59P57076 290 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 TAS2R39P59534 338 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 IL2P60568 153 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 B4GALNT1Q00973 533 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 PDE1CQ14123 709 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SIM2Q14190 667 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SMAD1Q15797 465 aaKnown RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 INSCQ1MX18 579 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 FAM83EQ2M2I3 478 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 TSNAXIP1Q2TAA8 658 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 ZNF789Q5FWF6 425 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 CTSL3PQ5NE16 218 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 PLEKHS1Q5SXH7 462 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 AGAP9Q5VTM2 703 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 KLC3Q6P597 504 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 MTERF4Q7Z6M4 381 aaKnown RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 TBC1D1Q86TI0 1168 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 TRABD2AQ86V40 505 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 AMZ2Q86W34 360 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 PARGQ86W56 976 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SYT12Q8IV01 421 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SLC41A1Q8IVJ1 513 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 TMEFF1Q8IYR6 380 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SDR16C5Q8N3Y7 309 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 OXR1Q8N573 874 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 CLDN19Q8N6F1 224 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms