RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 INTS8Q75QN2 995 aaKnown RBP3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 EXOC3L1Q86VI1 746 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 FOXRED2Q8IWF2 684 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 CHERPQ8IWX8 916 aaKnown RBP3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 AFAP1Q8N556 730 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 SLC5A8Q8N695 610 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 OR2AK2Q8NG84 335 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 SLC38A5Q8WUX1 472 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 SECTM1Q8WVN6 248 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 FIG4Q92562 907 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 LRRC59Q96AG4 307 aaKnown RBP3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 SCMH1Q96GD3 660 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 SPATC1LQ9H0A9 340 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 MMP27Q9H306 513 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 TAS2R14Q9NYV8 317 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 GAGE2DQ9UEU5 116 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 POLG2Q9UHN1 485 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 TMEM184BQ9Y519 407 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 PCDHAC2Q9Y5I4 1007 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 SAA2-SAA4A0A096LPE2 208 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 OR2A25A4D2G3 310 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 TMEM8BA6NDV4 472 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 LILRA5A6NI73 299 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 HNRNPCL2B2RXH8 293 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 FAM90A26D6RGX4 464 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 TSPAN1O60635 241 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 SOCS5O75159 536 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 ENTPD3O75355 529 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 RSL1D1O76021 490 aaKnown RBP3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 CGAP01215 116 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 LINC00271P0C7V0 271 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 NR2F1P10589 423 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 AKR1B1P15121 316 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 S1PR1P21453 382 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 SP100P23497 879 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 APOBEC1P41238 236 aaKnown RBP3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 CAPZA2P47755 286 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 BNC1Q01954 994 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 ZNF155Q12901 538 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 BAATQ14032 418 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 SYT16Q17RD7 645 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 KRT71Q3SY84 523 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 NSUN5P2Q63ZY6 315 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 HAUS6Q7Z4H7 955 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 KBTBD6Q86V97 674 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 KMT5CQ86Y97 462 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 OR8H2Q8N162 312 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 MINDY1Q8N5J2 469 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 METTL27Q8N6F8 245 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 C1orf52Q8N6N3 182 aaKnown RBP3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 PPFIBP2Q8ND30 876 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 TSPAN14Q8NG11 270 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 SLC22A18Q96BI1 424 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 MTERF3Q96E29 417 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 PPP1R13BQ96KQ4 1090 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 PAFAH2Q99487 392 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 SLX1AQ9BQ83 275 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 HGH1Q9BTY7 390 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 LRMDAQ9H2I8 198 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 KCNN2Q9H2S1 579 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 PDE7BQ9NP56 450 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 TRMT1Q9NXH9 659 aaKnown RBP3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 RCC2Q9P258 522 aaKnown RBP3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 HACL1Q9UJ83 578 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 PCDHGA5Q9Y5G8 931 aa3.66□□□□□ -1.82
HMGB1P36-201ENST00000487709 IGHV4OR15-8A0A075B7B6 117 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 hCG_1809904A0A1W2PP81 198 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 A0A1W2PPE2 198 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 A0A1W2PR64 198 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 MID1O15344 667 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNHIT1O43257 154 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 WDR1O75083 606 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 LDB3O75112 727 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 GJB3O75712 270 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 DDNO94850 711 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 CENPBP07199 599 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 FAM106CPP0CH98 169 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 TCEA1P23193 301 aaKnown RBP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 EEF1DP29692 281 aaKnown RBP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 MMP14P50281 582 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 CLDN20P56880 219 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 KRTAP10-12P60413 245 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 CXCL9Q07325 125 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 PLA2G7Q13093 441 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 TRAF3Q13114 568 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 NR1D2Q14995 579 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 IGSF11Q5DX21 431 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 C9orf152Q5JTZ5 239 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF280DQ6N043 979 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 MUC20Q8N307 709 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 RASGEF1CQ8N431 466 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 GUF1Q8N442 669 aaKnown RBP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 IL17RCQ8NAC3 791 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 SLC38A9Q8NBW4 561 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF114Q8NC26 417 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 LILRB1Q8NHL6 650 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF622Q969S3 477 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF653Q96CK0 615 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 SYT17Q9BSW7 474 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 MOV10L1Q9BXT6 1211 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms