RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 MYLK3Q32MK0 819 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 C9orf152Q5JTZ5 239 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 KCNT1Q5JUK3 1230 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 LCN10Q6JVE6 187 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 CEP97Q8IW35 865 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 CHERPQ8IWX8 916 aaKnown RBP4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 UBE2Q2Q8WVN8 375 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 TAAR8Q969N4 342 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 ZMAT2Q96NC0 199 aaKnown RBP4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 DACH2Q96NX9 599 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 CSF3RQ99062 836 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 SEMA3CQ99985 751 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 SF3B5Q9BWJ5 86 aaKnown RBP4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 C1QTNF7Q9BXJ2 289 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 RTN4RQ9BZR6 473 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 PPIL3Q9H2H8 161 aaKnown RBP4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 RABEP2Q9H5N1 569 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 DENND2DQ9H6A0 471 aaPredicted RBP4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 BCCIPQ9P287 314 aaKnown RBP eCLIP4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 WDR35Q9P2L0 1181 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 TSPYL4Q9UJ04 414 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 HACL1Q9UJ83 578 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 ZHX1Q9UKY1 873 aaPredicted RBP4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 PADI3Q9ULW8 664 aa4.91□□□□□ -1.62
PRPF38A-203ENST00000487160 PIK3C2BO00750 1634 aa4.9□□□□□ -1.62
PRPF38A-203ENST00000487160 LRP6O75581 1613 aa4.9□□□□□ -1.62
PRPF38A-203ENST00000487160 FAM135BQ49AJ0 1406 aa4.9□□□□□ -1.62
PRPF38A-203ENST00000487160 CASKIN1Q8WXD9 1431 aa4.9□□□□□ -1.62
PRPF38A-203ENST00000487160 MIA2Q96PC5 1412 aa4.9□□□□□ -1.62
PRPF38A-203ENST00000487160 LRRC9Q6ZRR7 1453 aa4.9□□□□□ -1.62
PRPF38A-203ENST00000487160 SCAF11Q99590 1463 aaKnown RBP4.9□□□□□ -1.62
PRPF38A-203ENST00000487160 FYCO1Q9BQS8 1478 aa4.9□□□□□ -1.62
PRPF38A-203ENST00000487160 FAM90A26D6RGX4 464 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 HS3ST1O14792 307 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 KCNN4O15554 427 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 UGT1A1P22309 533 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 ITGB8P26012 769 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 HOXA11P31270 313 aaPredicted RBP4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 ARRB2P32121 409 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 PCYT1AP49585 367 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 PGGT1BP53609 377 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 BNC1Q01954 994 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 DSC1Q08554 894 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 DHX34Q14147 1143 aaKnown RBP4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 C1orf141Q5JVX7 400 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 SPECC1Q5M775 1068 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 DAB2IPQ5VWQ8 1189 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 C18orf63Q68DL7 685 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 RGMBQ6NW40 437 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 PAPD4Q6PIY7 484 aaKnown RBP4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 LDB1Q86U70 411 aaPredicted RBP4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 FJX1Q86VR8 437 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 PGBD5Q8N414 524 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 GUF1Q8N442 669 aaKnown RBP4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 TDRD5Q8NAT2 981 aaKnown RBP4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 ACVR1CQ8NER5 493 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 GFI1Q99684 422 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 SPATC1LQ9H0A9 340 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 SLCO5A1Q9H2Y9 848 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 KCNK15Q9H427 330 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 RAD21L1Q9H4I0 556 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 TRMT1Q9NXH9 659 aaKnown RBP4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 GDE1Q9NZC3 331 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 C5AR2Q9P296 337 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 LARSQ9P2J5 1176 aaKnown RBP4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 ANAPC2Q9UJX6 822 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 FBXL2Q9UKC9 423 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 MYO6Q9UM54 1294 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 LOXL2Q9Y4K0 774 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 NWD1Q149M9 1564 aa4.9□□□□□ -1.63
PRPF38A-203ENST00000487160 KDM5AP29375 1690 aaKnown RBP4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 ABCC3O15438 1527 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 SLIT1O75093 1534 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 MYO5BQ9ULV0 1848 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 A0A0U1RQJ8 604 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 MAGEB17A8MXT2 336 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 CLGNO14967 610 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 ANKRD28O15084 1053 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 ZNF217O75362 1048 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 SRCP12931 536 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 HRH2P25021 359 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 NMBRP28336 390 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 FASLGP48023 281 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 CLCNKAP51800 687 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 TRAF3Q13114 568 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 PSMD6Q15008 389 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 MEP1AQ16819 746 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 FAM98BQ52LJ0 330 aaKnown RBP4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 EFHC1Q5JVL4 640 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 BRAT1Q6PJG6 821 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 TPRG1Q6ZUI0 275 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 INTS8Q75QN2 995 aaKnown RBP4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 C1QL2Q7Z5L3 287 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 ZNF34Q8IZ26 560 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 PELI3Q8N2H9 469 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 EMC1Q8N766 993 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 LPGAT1Q92604 370 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 ZNF48Q96MX3 618 aaPredicted RBP4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 CAMK1GQ96NX5 476 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms