RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 GPSM3Q9Y4H4 160 aa22.52■■□□□ 1.2
NBPF3-212ENST00000486229 PCDHGB2Q9Y5G2 931 aa22.52■■□□□ 1.2
NBPF3-212ENST00000486229 CSNK1G3Q9Y6M4 447 aa22.52■■□□□ 1.2
NBPF3-212ENST00000486229 TMEM131Q92545 1883 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 ADAMTS9Q9P2N4 1935 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 DNAJC6O75061 913 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 FTH1P02794 183 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 ERVK-10P10266 1014 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 RPS3P23396 243 aaKnown RBP eCLIP22.51■■□□□ 1.19
NBPF3-212ENST00000486229 SSTR1P30872 391 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 CDKN1CP49918 316 aaPredicted RBP22.51■■□□□ 1.19
NBPF3-212ENST00000486229 BNC1Q01954 994 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 SLC14A1Q13336 389 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 BCL7AQ4VC05 210 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 PYCR3Q53H96 274 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 TPRG1LQ5T0D9 272 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 EMBQ6PCB8 327 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 KDM7AQ6ZMT4 941 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 MARK2Q7KZI7 788 aaKnown RBP22.51■■□□□ 1.19
NBPF3-212ENST00000486229 GKN2Q86XP6 184 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 MINDY1Q8N5J2 469 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 PDXPQ96GD0 296 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 PANX3Q96QZ0 392 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 TIMM29Q9BSF4 260 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 EDEM2Q9BV94 578 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 CDC42EP4Q9H3Q1 356 aaKnown RBP22.51■■□□□ 1.19
NBPF3-212ENST00000486229 LRRC4CQ9HCJ2 640 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 ARFGAP3Q9NP61 516 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 DNAAF2Q9NVR5 837 aaKnown RBP22.51■■□□□ 1.19
NBPF3-212ENST00000486229 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.51■■□□□ 1.19
NBPF3-212ENST00000486229 CORO1CQ9ULV4 474 aaPredicted RBP22.51■■□□□ 1.19
NBPF3-212ENST00000486229 DOLKQ9UPQ8 538 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 V9GYY5 206 aaPredicted RBP22.51■■□□□ 1.19
NBPF3-212ENST00000486229 LRP4O75096 1905 aa22.51■■□□□ 1.19
NBPF3-212ENST00000486229 TDRD6O60522 2096 aaKnown RBP22.5■■□□□ 1.19
NBPF3-212ENST00000486229 GOLGA8KD6RF30 607 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 GOLGA8TH3BQL2 631 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 KPNA5O15131 536 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 GPR39O43194 453 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 PCDHGA12O60330 932 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 MTX2O75431 263 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 ESR1P03372 595 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 ALPPL2P10696 532 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 POLD2P49005 469 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 PMS2P54278 862 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 KYNUQ16719 465 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 LVRNQ6Q4G3 990 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 TMEM220Q6QAJ8 160 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 CAPN12Q6ZSI9 719 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 RASGEF1AQ8N9B8 481 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 C2CD4AQ8NCU7 369 aaPredicted RBP22.5■■□□□ 1.19
NBPF3-212ENST00000486229 SMOC1Q9H4F8 434 aa22.5■■□□□ 1.19
NBPF3-212ENST00000486229 MARCH4Q9P2E8 410 aaPredicted RBP22.5■■□□□ 1.19
NBPF3-212ENST00000486229 TCRBV9S1A1TA0A576 114 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 UBA6A0AVT1 1052 aaPredicted RBP22.49■■□□□ 1.19
NBPF3-212ENST00000486229 AQP9O43315 295 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 PIAS2O75928 621 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 EPHA8P29322 1005 aaPredicted RBP22.49■■□□□ 1.19
NBPF3-212ENST00000486229 SLC1A2P43004 574 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 LEPRP48357 1165 aaKnown RBP22.49■■□□□ 1.19
NBPF3-212ENST00000486229 PRLHRP49683 370 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 VSNL1P62760 191 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 SF3A2Q15428 464 aaKnown RBP22.49■■□□□ 1.19
NBPF3-212ENST00000486229 INSCQ1MX18 579 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 PRRT3Q5FWE3 981 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 TEDDM1Q5T9Z0 273 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 PTRHD1Q6GMV3 140 aaKnown RBP22.49■■□□□ 1.19
NBPF3-212ENST00000486229 TCEAL6Q6IPX3 200 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 TCEAL3Q969E4 200 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 LINC00615Q96LM1 132 aaPredicted RBP22.49■■□□□ 1.19
NBPF3-212ENST00000486229 CYTH2Q99418 400 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 DUSP23Q9BVJ7 150 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 PARD6BQ9BYG5 372 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 MRPL40Q9NQ50 206 aaKnown RBP22.49■■□□□ 1.19
NBPF3-212ENST00000486229 TM7SF3Q9NS93 570 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 NINJ2Q9NZG7 142 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 PIKFYVEQ9Y2I7 2098 aa22.49■■□□□ 1.19
NBPF3-212ENST00000486229 A0A087WUV0 522 aaPredicted RBP22.48■■□□□ 1.19
NBPF3-212ENST00000486229 C17orf113A0A1B0GUU1 675 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 OR2AG2A6NM03 316 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 ERLIN1O75477 346 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 ABHD2P08910 425 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 SLC2A4P14672 509 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 CLCNKAP51800 687 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 PLOD1Q02809 727 aaPredicted RBP22.48■■□□□ 1.19
NBPF3-212ENST00000486229 CTBP1Q13363 440 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 SEMA3AQ14563 771 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 KLHL38Q2WGJ6 581 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 ZNF648Q5T619 568 aaPredicted RBP22.48■■□□□ 1.19
NBPF3-212ENST00000486229 AMZ2Q86W34 360 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 BEND7Q8N7W2 519 aaPredicted RBP22.48■■□□□ 1.19
NBPF3-212ENST00000486229 SGF29Q96ES7 293 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 CCDC77Q9BR77 488 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 CCM2Q9BSQ5 444 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 EVA1BQ9NVM1 165 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 RAB21Q9UL25 225 aa22.48■■□□□ 1.19
NBPF3-212ENST00000486229 TPP1O14773 563 aa22.47■■□□□ 1.19
NBPF3-212ENST00000486229 S1PR4O95977 384 aa22.47■■□□□ 1.19
NBPF3-212ENST00000486229 ANXA6P08133 673 aa22.47■■□□□ 1.19
NBPF3-212ENST00000486229 PRSS56P0CW18 603 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms