RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 OR56A4Q8NGH8 313 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 TMX3Q96JJ7 454 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 USP28Q96RU2 1077 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 SLC25A23Q9BV35 468 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 SLAMF7Q9NQ25 335 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 ST7Q9NRC1 585 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 FBXO8Q9NRD0 319 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 SPATS2LQ9NUQ6 558 aaKnown RBP6.57□□□□□ -1.36
SMC4-217ENST00000485867 COX16Q9P0S2 106 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 PDP2Q9P2J9 529 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 PCDHGA9Q9Y5G4 932 aaKnown RBP6.57□□□□□ -1.36
SMC4-217ENST00000485867 ACTL7AQ9Y615 435 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 X6R8D5 127 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 PIKFYVEQ9Y2I7 2098 aa6.57□□□□□ -1.36
SMC4-217ENST00000485867 NIPBLQ6KC79 2804 aaeCLIP6.56□□□□□ -1.36
SMC4-217ENST00000485867 CACNA1CQ13936 2221 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 HEATR9A2RTY3 570 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 A6NCN8 305 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 KRIT1O00522 736 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 PPM1DO15297 605 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 INPP4BO15327 924 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 TBX1O43435 398 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 CALUO43852 315 aaPredicted RBP6.56□□□□□ -1.36
SMC4-217ENST00000485867 LRCH4O75427 683 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 CREG1O75629 220 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 CD160O95971 181 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 FGF1P05230 155 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 CCNB1P14635 433 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 ACADSBP45954 432 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 RPL11P62913 178 aaKnown RBP6.56□□□□□ -1.36
SMC4-217ENST00000485867 YWHAZP63104 245 aaKnown RBP6.56□□□□□ -1.36
SMC4-217ENST00000485867 CDK17Q00537 523 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 SLC20A2Q08357 652 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 CHAF1BQ13112 559 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 MTA1Q13330 715 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 STILQ15468 1287 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 TAF5Q15542 800 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 NFIL3Q16649 462 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 TMEM52BQ4KMG9 183 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 MROH9Q5TGP6 573 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 E4F1Q66K89 784 aaPredicted RBP6.56□□□□□ -1.36
SMC4-217ENST00000485867 ANKRD40Q6AI12 368 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 TMEM270Q6UE05 265 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 SPNS3Q6ZMD2 512 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 GDF7Q7Z4P5 450 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 ARHGAP22Q7Z5H3 698 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 MILR1Q7Z6M3 343 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 NRROSQ86YC3 692 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 GRAMD1CQ8IYS0 662 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 RYBPQ8N488 228 aaPredicted RBP6.56□□□□□ -1.36
SMC4-217ENST00000485867 PATE1Q8WXA2 126 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 PPP1R14AQ96A00 147 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 ISG20Q96AZ6 181 aaKnown RBP6.56□□□□□ -1.36
SMC4-217ENST00000485867 C19orf60Q96EN9 201 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 RNF31Q96EP0 1072 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 KLHL32Q96NJ5 620 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 RANBP9Q96S59 729 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 TWSG1Q9GZX9 223 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 SIK2Q9H0K1 926 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 EXOC1Q9NV70 894 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 MPP6Q9NZW5 540 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 TMEFF2Q9UIK5 374 aaPredicted RBP6.56□□□□□ -1.36
SMC4-217ENST00000485867 SNX10Q9Y5X0 201 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 ACANP16112 2415 aa6.56□□□□□ -1.36
SMC4-217ENST00000485867 TACC2O95359 2948 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 ILVBLA1L0T0 632 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 PRSS38A1L453 326 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 PIPSLA2A3N6 862 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 ANKUB1A6NFN9 424 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 A8MU76 341 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 E5RJQ4 531 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 PRSS44E7EML9 344 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 I6L893 689 aaPredicted RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 CACNB4O00305 520 aaPredicted RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 POLR2DO15514 142 aaKnown RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 DPM1O60762 260 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 PPP6R2O75170 966 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 KATNA1O75449 491 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 GSRP00390 522 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 PLATP00750 562 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 SCG5P05408 212 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 ZNF28P17035 718 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 ATF4P18848 351 aaPredicted RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 TBXAS1P24557 533 aaPredicted RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 NFKBIAP25963 317 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 OR1E1P30953 314 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 PSMC2P35998 433 aaKnown RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 GPD2P43304 727 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 BIRC2Q13490 618 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 DNASE1L3Q13609 305 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 ZRSR2Q15696 482 aaKnown RBP6.55□□□□□ -1.36
SMC4-217ENST00000485867 CHRNA6Q15825 494 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 CR1LQ2VPA4 569 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 CBWD6Q4V339 395 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 CBWD3Q5JTY5 395 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 EFHC1Q5JVL4 640 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 CBWD5Q5RIA9 395 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 SHC4Q6S5L8 630 aa6.55□□□□□ -1.36
SMC4-217ENST00000485867 GDPD4Q6W3E5 623 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms