RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 IL9RQ01113 521 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 PDIA2Q13087 525 aaKnown RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 CBLBQ13191 982 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 ILKQ13418 452 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 FRG1Q14331 258 aaKnown RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 NR0B2Q15466 257 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 INSCQ1MX18 579 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 PYCR3Q53H96 274 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 PTRHD1Q6GMV3 140 aaKnown RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 TMEM220Q6QAJ8 160 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 PACS1Q6VY07 963 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 DBX2Q6ZNG2 339 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 MARK2Q7KZI7 788 aaKnown RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 CHST15Q7LFX5 561 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 SERPINA9Q86WD7 417 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 EID2Q8N6I1 236 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 FAM181AQ8N9Y4 354 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 OR13J1Q8NGT2 312 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 GPR150Q8NGU9 434 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 OR4C6Q8NH72 309 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 GPBAR1Q8TDU6 330 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 CDKL2Q92772 493 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 NAT6Q93015 286 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 SH3KBP1Q96B97 665 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 ZNF669Q96BR6 464 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 SIGLEC10Q96LC7 697 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 CCM2Q9BSQ5 444 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 DPEP2Q9H4A9 486 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 SUDS3Q9H7L9 328 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 IL21RQ9HBE5 538 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 EPB41L5Q9HCM4 733 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 TREX1Q9NSU2 369 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 C20orf96Q9NUD7 363 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 INTS10Q9NVR2 710 aaKnown RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 NSMCE4AQ9NXX6 385 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 TXNDC16Q9P2K2 825 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 GNPTGQ9UJJ9 305 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 ACSL5Q9ULC5 683 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 LHX6Q9UPM6 363 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 APOBEC2Q9Y235 224 aaKnown RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 PCDHB1Q9Y5F3 818 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 COMMD10Q9Y6G5 202 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 LRRK1Q38SD2 2015 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 PLXNA2O75051 1894 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 FRYQ5TBA9 3013 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 TRBV5-4A0A0C4DH59 114 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 C17orf113A0A1B0GUU1 675 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 MGAT4DA6NG13 374 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 PRMT5O14744 637 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-208ENST00000485618 CHUKO15111 745 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 FFAR2O15552 330 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 SH3BP5O60239 455 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 KDM1AO60341 852 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 SDC3O75056 442 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 DNAJC6O75061 913 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 POP7O75817 140 aaKnown RBP8.15□□□□□ -1.1
SF3A1-208ENST00000485618 SLU7O95391 586 aaKnown RBP8.15□□□□□ -1.1
SF3A1-208ENST00000485618 ESR1P03372 595 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 CD59P13987 128 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 OGNP20774 298 aaKnown RBP8.15□□□□□ -1.1
SF3A1-208ENST00000485618 NMBRP28336 390 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 PHBP35232 272 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 ELK3P41970 407 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 ACTR1BP42025 376 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 POLD2P49005 469 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 ACTR1AP61163 376 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 E2F1Q01094 437 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 CTBSQ01459 385 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 SLC7A5Q01650 507 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 DHX9Q08211 1270 aaKnown RBP8.15□□□□□ -1.1
SF3A1-208ENST00000485618 BNIP3Q12983 259 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 RPA4Q13156 261 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 C1orf61Q13536 156 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 PTPRCAPQ14761 206 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 SLMAPQ14BN4 828 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 TMED2Q15363 201 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 TRIP6Q15654 476 aaKnown RBP8.15□□□□□ -1.1
SF3A1-208ENST00000485618 BCL7AQ4VC05 210 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 FNBP1LQ5T0N5 605 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 KIAA0408Q6ZU52 694 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 ZNF534Q76KX8 674 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 PIP4P1Q86T03 277 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 TRIM74Q86UV6 250 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 CCDC25Q86WR0 208 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 GATAD2AQ86YP4 633 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 ZBED8Q8IZ13 594 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 PELI3Q8N2H9 469 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 SLC25A45Q8N413 288 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 ARL10Q8N8L6 244 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 EIF1ADQ8N9N8 165 aaKnown RBP8.15□□□□□ -1.1
SF3A1-208ENST00000485618 OR2I1PQ8NGU4 316 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 ASZ1Q8WWH4 475 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 SEC14L1Q92503 715 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 MFSD3Q96ES6 412 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 PDXPQ96GD0 296 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 PANX3Q96QZ0 392 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 LRRC61Q9BV99 259 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 TMEM168Q9H0V1 697 aa8.15□□□□□ -1.1
SF3A1-208ENST00000485618 ABCG4Q9H172 646 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms