RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CTGFP29279 349 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 RYKP34925 604 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 MDH1P40925 334 aaKnown RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 WNT5AP41221 380 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 AVPR1BP47901 424 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 ARCN1P48444 511 aaKnown RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 ZNF84P51523 738 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 HNRNPMP52272 730 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 GBX2P52951 348 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 SH3BGRP55822 239 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 SCGB2A2Q13296 93 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 RIPK1Q13546 671 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 SOWAHAQ2M3V2 549 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 MAJINQ3KP22 176 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 RABL6Q3YEC7 729 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 LRRC23Q53EV4 343 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 ARL13AQ5H913 290 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 RIPPLY2Q5TAB7 128 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 FAM198BQ6UWH4 519 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 KIRREL2Q6UWL6 708 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 CCBE1Q6UXH8 406 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 NHLRC1Q6VVB1 395 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 C15orf52Q6ZUT6 534 aaKnown RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 MARK2Q7KZI7 788 aaKnown RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 RUFY3Q7L099 469 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 TAF8Q7Z7C8 310 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 ZNF410Q86VK4 478 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 WDR5BQ86VZ2 330 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 PM20D2Q8IYS1 436 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 FBXO39Q8N4B4 442 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 EXD3Q8N9H8 876 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 AGBL3Q8NEM8 1001 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 ABHD11Q8NFV4 315 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 EXD1Q8NHP7 514 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 EXOC6Q8TAG9 804 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 WIPF2Q8TF74 440 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 HDAC7Q8WUI4 952 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 HEXDCQ8WVB3 486 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 UBLCP1Q8WVY7 318 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 RAB7BQ96AH8 199 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 NACC2Q96BF6 587 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 FBXL8Q96CD0 374 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 TUBGCP3Q96CW5 907 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 SNRNP40Q96DI7 357 aaKnown RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 C14orf79Q96F83 325 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 BSCL2Q96G97 398 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 MS4A10Q96PG2 267 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 MXRA8Q9BRK3 442 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 FZD8Q9H461 694 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 NCOR1P1Q9H4R4 102 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 NGBQ9NPG2 151 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 AKIP1Q9NQ31 210 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 PPANQ9NQ55 473 aaKnown RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 DDX4Q9NQI0 724 aaKnown RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 ASNSD1Q9NWL6 643 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 MTMR10Q9NXD2 777 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 EHD3Q9NZN3 535 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 TMOD2Q9NZR1 351 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 SEMA5BQ9P283 1151 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 MAD2L2Q9UI95 211 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 TRMT6Q9UJA5 497 aaKnown RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 COX11Q9Y6N1 276 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 ARHGEF40Q8TER5 1519 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 DHX29Q7Z478 1369 aaKnown RBP4.41□□□□□ -1.7
PTCD3-214ENST00000483925 MST1RQ04912 1400 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 C1orf226A1L170 272 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 CFAP73A6NFT4 308 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 ARHGAP42A6NI28 874 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 C2orf81A6NN90 581 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 SGK1O00141 431 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 CLDN4O14493 209 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 ATP2A1O14983 1001 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 ST8SIA3O43173 380 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 KLHL41O60662 606 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 HSF2BPO75031 334 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 PRDM1O75626 825 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 NCR1O76036 304 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 AKR7A3O95154 331 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 NDUFA10O95299 355 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 DIRAS3O95661 229 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 TGFAP01135 160 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 RHOP08100 348 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 TOP1P11387 765 aaKnown RBP4.41□□□□□ -1.7
PTCD3-214ENST00000483925 CCNCP24863 283 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 HOXD9P28356 352 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-214ENST00000483925 CHRNA5P30532 468 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 SFNP31947 248 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 CHRNA3P32297 505 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 SHMT1P34896 483 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 UCP2P55851 309 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 SORDQ00796 357 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 SLC18A2Q05940 514 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 ELP6Q0PNE2 266 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 GRIK3Q13003 919 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 NAE1Q13564 534 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 LPIN1Q14693 890 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 ANXA2RQ3ZCQ2 193 aa4.41□□□□□ -1.7
PTCD3-214ENST00000483925 ATP13A5Q4VNC0 1218 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms