RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 EEF1DP29692 281 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 RECQLP46063 649 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 SPINT3P49223 89 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 ATP6V0D1P61421 351 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 SLC25A3Q00325 362 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 GALNT1Q10472 559 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 ILF2Q12905 390 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 FOXD4Q12950 439 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 KLF10Q13118 480 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 METTL21CQ5VZV1 264 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 GRAMD4Q6IC98 578 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 SBSNQ6UWP8 590 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 Q6ZVL8 140 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 PLPP6Q8IY26 295 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 RBFAQ8N0V3 343 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 NKAPQ8N5F7 415 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 DCBLD1Q8N8Z6 715 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 TRPC4APQ8TEL6 797 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 DLG3Q92796 817 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 PBXIP1Q96AQ6 731 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 CATSPER2Q96P56 530 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 NECAB3Q96P71 396 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 GAS2L1Q99501 681 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 CDCA3Q99618 268 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 TUBB6Q9BUF5 446 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 ZNF385DQ9H6B1 395 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 PCDH12Q9NPG4 1184 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 VTI1BQ9UEU0 232 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 DNAJC15Q9Y5T4 150 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 PFDN6O15212 129 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 KLK8O60259 260 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 HNRNPCL1O60812 293 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 ADH1CP00326 375 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 RPS3P23396 243 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 ETV3P41162 512 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 HYAL1Q12794 435 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 RIPK1Q13546 671 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 NAA25Q14CX7 972 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 TGFBIQ15582 683 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 ACSBG2Q5FVE4 666 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 GPRC6AQ5T6X5 926 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 NXNQ6DKJ4 435 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 BRAT1Q6PJG6 821 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 TMPRSS6Q8IU80 811 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 FBXO39Q8N4B4 442 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 ZNF557Q8N988 423 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 WDR60Q8WVS4 1066 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 C19orf43Q9BQ61 176 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 PLA2G2FQ9BZM2 168 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 MID1IP1Q9NPA3 183 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 SEMA4BQ9NPR2 832 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 IL36AQ9UHA7 158 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 ADAMTS6Q9UKP5 1117 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 HCN2Q9UL51 889 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 SUFUQ9UMX1 484 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 CDYLQ9Y232 598 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 ITM2BQ9Y287 266 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 SLC27A6Q9Y2P4 619 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 L3MBTL1Q9Y468 752 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 PCDHB1Q9Y5F3 818 aa8.73□□□□□ -1.01
CDC42SE1-204ENST00000483763 SLCO1B7G3V0H7 640 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 SORBS2O94875 1100 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 NNMTP40261 264 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 RALGDSQ12967 914 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 PHKG1Q16816 387 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 GPR33Q49SQ1 333 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 KHDC1Q4VXA5 237 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 ZNF648Q5T619 568 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 VITQ6UXI7 678 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 MACC1Q6ZN28 852 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 DET1Q7L5Y6 550 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 GPR149Q86SP6 731 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 SNX31Q8N9S9 440 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 AGAP11Q8TF27 550 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.72□□□□□ -1.017e-6■■■■■ 27.5
CDC42SE1-204ENST00000483763 RAB3IPQ96QF0 476 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 RPP25Q9BUL9 199 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 TUBB1Q9H4B7 451 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 NSUN3Q9H649 340 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 MEAF6Q9HAF1 191 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 EML4Q9HC35 981 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 FBRSL1Q9HCM7 1045 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 CD248Q9HCU0 757 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 DZANK1Q9NVP4 752 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 GIMAP2Q9UG22 337 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 NCOR1O75376 2440 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 DOCK8Q8NF50 2099 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 WDR87Q6ZQQ6 2873 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 SPECC1L-ADORA2AF8WAN1 911 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 PLK4O00444 970 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 E2F3O00716 465 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 RPS17P08708 135 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 HK2P52789 917 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 POLR2LP62875 67 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 CLCQ05315 142 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 DLX2Q07687 328 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 GRM2Q14416 872 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 TBCCQ15814 346 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 SNCBQ16143 134 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms