RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ZNF547Q8IVP9 402 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 SIDT2Q8NBJ9 832 aaKnown RBP7.25□□□□□ -1.25
CSDE1-206ENST00000483030 PRR7Q8TB68 274 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 THAP4Q8WY91 577 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 SEC14L1Q92503 715 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 GLYATL1Q969I3 302 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 CXorf40BQ96DE9 158 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 TRIM11Q96F44 468 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 FCRL4Q96PJ5 515 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 TSGA13Q96PP4 275 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 ADGRE3Q9BY15 652 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 BRD8Q9H0E9 1235 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 ISCUQ9H1K1 167 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 HSD3B7Q9H2F3 369 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 OCEL1Q9H607 264 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 ZFYVE1Q9HBF4 777 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 MLXIPLQ9NP71 852 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 ACSS2Q9NR19 701 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 POT1Q9NUX5 634 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 HAUS2Q9NVX0 235 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 CUEDC1Q9NWM3 386 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-206ENST00000483030 AIPL1Q9NZN9 384 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 LUZP4Q9P127 313 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 MAP10Q9P2G4 905 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 AMACRQ9UHK6 382 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 SHOC2Q9UQ13 582 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 WDR37Q9Y2I8 494 aa7.25□□□□□ -1.25
CSDE1-206ENST00000483030 PCDHGA9Q9Y5G4 932 aaKnown RBP7.25□□□□□ -1.25
CSDE1-206ENST00000483030 RP1L1Q8IWN7 2480 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 KCNK1O00180 336 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 SORBS2O94875 1100 aaKnown RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 DDAH2O95865 285 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 SLC4A1P02730 911 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 MMP2P08253 660 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 EBLN1P0CF75 366 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 IDSP22304 550 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 PRKCIP41743 596 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 ARL4DP49703 201 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 ARSEP51690 589 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 PDE1BQ01064 536 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 GBE1Q04446 702 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 SLC10A2Q12908 348 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 MRPL49Q13405 166 aaKnown RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 IL10RAQ13651 578 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 GALNT3Q14435 633 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 KHDC1Q4VXA5 237 aaKnown RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 AGAP9Q5VTM2 703 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 PAPD7Q5XG87 772 aaKnown RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 NCBP2-AS2Q69YL0 99 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 JMJD6Q6NYC1 403 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 CYB5D1Q6P9G0 228 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 SASS6Q6UVJ0 657 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 WASH2PQ6VEQ5 465 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 TMC3Q7Z5M5 1100 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 SYVN1Q86TM6 617 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 BPHLQ86WA6 291 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 RBM12BQ8IXT5 1001 aaKnown RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 TRAM1L1Q8N609 369 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 KCTD6Q8NC69 237 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 CCNYQ8ND76 341 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 FAM71BQ8TC56 605 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 UBXN4Q92575 508 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 MR1Q95460 341 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 FATE1Q969F0 183 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 SLC41A2Q96JW4 573 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 MAP3K3Q99759 626 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 TIMM29Q9BSF4 260 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 ZSCAN5AQ9BUG6 496 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 NUP85Q9BW27 656 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 RAB33BQ9H082 229 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 SLAMF7Q9NQ25 335 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 WASH6PQ9NQA3 447 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 FGF21Q9NSA1 209 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 ANO10Q9NW15 660 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 CHMP5Q9NZZ3 219 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 SEMA5BQ9P283 1151 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 IP6K2Q9UHH9 426 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 FARSAQ9Y285 508 aaKnown RBP7.24□□□□□ -1.25
CSDE1-206ENST00000483030 ZNF451Q9Y4E5 1061 aa7.24□□□□□ -1.25
CSDE1-206ENST00000483030 A6NL46 340 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 POM121CA8CG34 1229 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 MYO1FO00160 1098 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 ZNF185O15231 689 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 VEGFDO43915 354 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 BPIP17213 487 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 MX2P20592 715 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 LPOP22079 712 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-206ENST00000483030 GJC1P36383 396 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 HALP42357 657 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 PTGIRP43119 386 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 DCDC1P59894 354 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 ACY1Q03154 408 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 TMEM115Q12893 351 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-206ENST00000483030 LAMB3Q13751 1172 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 DPYSL3Q14195 570 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 CHRNA6Q15825 494 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 RPE65Q16518 533 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 HADHQ16836 314 aaKnown RBP7.23□□□□□ -1.25
CSDE1-206ENST00000483030 CCDC183Q5T5S1 534 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 PRAMEF17Q5VTA0 474 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms