RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 HES3Q5TGS1 186 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 IYDQ6PHW0 289 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 WASH2PQ6VEQ5 465 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 JAMLQ86YT9 394 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SFRP1Q8N474 314 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SPATA4Q8NEY3 305 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 OR6P1Q8NGX9 317 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 OR4L1Q8NH43 312 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SGF29Q96ES7 293 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 LINC00615Q96LM1 132 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-214ENST00000482733 ZNF778Q96MU6 729 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SERPINB12Q96P63 405 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 OSGEPL1Q9H4B0 414 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 WASH6PQ9NQA3 447 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 TREX1Q9NSU2 369 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SYBUQ9NX95 663 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SAMD15Q9P1V8 674 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 ANAPC5Q9UJX4 755 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 KLK13Q9UKR3 277 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 SOX13Q9UN79 622 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 CLCA2Q9UQC9 943 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 DNAJC16Q9Y2G8 782 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 RNF215Q9Y6U7 377 aa16.33■□□□□ 0.2
HMGN1-214ENST00000482733 BPTFQ12830 3046 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 A6NCN8 305 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 PRR19A6NJB7 356 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 F8W8V4 182 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 QSOX1O00391 747 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 NDC80O14777 642 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 TCEA3O75764 348 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 AP2A2O94973 939 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 MT-CO3P00414 261 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 PAMP19021 973 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 NSG1P42857 185 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 GPR3P46089 330 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 FASLGP48023 281 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 CDKN1CP49918 316 aaPredicted RBP16.32■□□□□ 0.2
HMGN1-214ENST00000482733 MAZP56270 477 aaKnown RBP16.32■□□□□ 0.2
HMGN1-214ENST00000482733 CRADDP78560 199 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 B4GALNT1Q00973 533 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 DBN1Q16643 649 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 AGAP9Q5VTM2 703 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 CDCP2Q5VXM1 449 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 CASC4Q6P4E1 433 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 CCNI2Q6ZMN8 369 aaPredicted RBP16.32■□□□□ 0.2
HMGN1-214ENST00000482733 DET1Q7L5Y6 550 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 ZNF438Q7Z4V0 828 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 SLC9B2Q86UD5 537 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 SFTPA2Q8IWL1 248 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 PIANPQ8IYJ0 282 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 SH3KBP1Q96B97 665 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 KRT12Q99456 494 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 VPS37BQ9H9H4 285 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 PRDM8Q9NQV8 689 aa16.32■□□□□ 0.2
HMGN1-214ENST00000482733 MGAT4DA6NG13 374 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 OR51F1A6NGY5 319 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 PDZK1P1A8MUH7 402 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 GOLGA8MH3BSY2 632 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 AVILO75366 819 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 GSTM1P09488 218 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 SPINK2P20155 84 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 MAGEA3P43357 314 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 PRLHRP49683 370 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 GSTM4Q03013 218 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 CKAP4Q07065 602 aaKnown RBP16.31■□□□□ 0.2
HMGN1-214ENST00000482733 NR1D2Q14995 579 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 IZUMO3Q5VZ72 239 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 ABRAXAS1Q6UWZ7 409 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 PACS1Q6VY07 963 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 MAATS1Q7Z4T9 603 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 CCNJLQ8IV13 435 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 BEND7Q8N7W2 519 aaPredicted RBP16.31■□□□□ 0.2
HMGN1-214ENST00000482733 DCBLD1Q8N8Z6 715 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 OR2L2Q8NH16 312 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 SLC37A2Q8TED4 501 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 PATE1Q8WXA2 126 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 GRAMD1AQ96CP6 724 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 DEPDC7Q96QD5 511 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 SARS2Q9NP81 518 aaKnown RBP16.31■□□□□ 0.2
HMGN1-214ENST00000482733 CATSPERZQ9NTU4 200 aa16.31■□□□□ 0.2
HMGN1-214ENST00000482733 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.31■□□□□ 0.2
HMGN1-214ENST00000482733 ZNF106Q9H2Y7 1883 aaKnown RBP16.31■□□□□ 0.2
HMGN1-214ENST00000482733 C17orf113A0A1B0GUU1 675 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 FAM237BA0A1B0GVD1 139 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 FAM187AA6NFU0 413 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 TTI1O43156 1089 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 SGTAO43765 313 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 EML2O95834 649 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 PRSS56P0CW18 603 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 IVDP26440 423 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 NMBRP28336 390 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 HALP42357 657 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 SPIDRQ14159 915 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 MORF4L2Q15014 288 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 CLPPQ16740 277 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-214ENST00000482733 DNAJC21Q5F1R6 531 aaKnown RBP16.3■□□□□ 0.2
HMGN1-214ENST00000482733 RBM44Q6ZP01 1051 aaKnown RBP16.3■□□□□ 0.2
HMGN1-214ENST00000482733 ZNF572Q7Z3I7 529 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-214ENST00000482733 SPRED1Q7Z699 444 aa16.3■□□□□ 0.2
HMGN1-214ENST00000482733 MPP5Q8N3R9 675 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms