RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 PPP1R21Q6ZMI0 780 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 KDELC2Q7Z4H8 507 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 HID1Q8IV36 788 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 NLGN4XQ8N0W4 816 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 CNTD1Q8N815 330 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 RCBTB1Q8NDN9 531 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 NLGN4YQ8NFZ3 816 aaPredicted RBP14.38□□□□□ -0.11
USP11-207ENST00000478596 SPATA22Q8NHS9 363 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 STARD8Q92502 1023 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 ART4Q93070 314 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 RAB7BQ96AH8 199 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 TUBGCP5Q96RT8 1024 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 RDH14Q9HBH5 336 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 FAM153AQ9UHL3 310 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 AAR2Q9Y312 384 aaKnown RBP14.38□□□□□ -0.11
USP11-207ENST00000478596 UTP11Q9Y3A2 253 aaKnown RBP14.38□□□□□ -0.11
USP11-207ENST00000478596 UNC13CQ8NB66 2214 aa14.38□□□□□ -0.11
USP11-207ENST00000478596 PRRC2CQ9Y520 2896 aaKnown RBP14.37□□□□□ -0.11
USP11-207ENST00000478596 IGHV5-10-1A0A0J9YXX1 117 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 LOC101059948A0A1B0GTJ6 334 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 FAM187AA6NFU0 413 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 EFCAB8A8MWE9 144 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 TCP11X1B4DZS4 312 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 HNRNPRO43390 633 aaKnown RBP14.37□□□□□ -0.11
USP11-207ENST00000478596 SOCS5O75159 536 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 RASGRP1O95267 797 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 MT-CYBP00156 380 aaPredicted RBP14.37□□□□□ -0.11
USP11-207ENST00000478596 APRTP07741 180 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 TCN2P20062 427 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 NFKBIAP25963 317 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 RPL22P35268 128 aaKnown RBP14.37□□□□□ -0.11
USP11-207ENST00000478596 CSNK1DP48730 415 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 NSUN2Q08J23 767 aaKnown RBP eCLIP14.37□□□□□ -0.11
USP11-207ENST00000478596 NIPAL4Q0D2K0 466 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 TRA2AQ13595 282 aaKnown RBP eCLIP14.37□□□□□ -0.11
USP11-207ENST00000478596 HLTFQ14527 1009 aaKnown RBP eCLIP14.37□□□□□ -0.11
USP11-207ENST00000478596 PARP6Q2NL67 630 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 ARMC12Q5T9G4 340 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 GDPD4Q6W3E5 623 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 PARS2Q7L3T8 475 aaKnown RBP14.37□□□□□ -0.11
USP11-207ENST00000478596 GLIS1Q8NBF1 620 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 AGBL5Q8NDL9 886 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 LPCAT1Q8NF37 534 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 IMP4Q96G21 291 aaKnown RBP14.37□□□□□ -0.11
USP11-207ENST00000478596 KLHL32Q96NJ5 620 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 FCRL5Q96RD9 977 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 FICDQ9BVA6 458 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 DPH5Q9H2P9 285 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 L2HGDHQ9H9P8 463 aa14.37□□□□□ -0.11
USP11-207ENST00000478596 B4E171 279 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 NDC80O14777 642 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 PSMD3O43242 534 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 B4GAT1O43505 415 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 ZNF821O75541 412 aaPredicted RBP14.36□□□□□ -0.11
USP11-207ENST00000478596 HEXIM1O94992 359 aaKnown RBP14.36□□□□□ -0.11
USP11-207ENST00000478596 SLU7O95391 586 aaKnown RBP14.36□□□□□ -0.11
USP11-207ENST00000478596 CD68P34810 354 aaPredicted RBP14.36□□□□□ -0.11
USP11-207ENST00000478596 TSPAN7P41732 249 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 RAB15P59190 212 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 ABHD18Q0P651 414 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 CALCOCO2Q13137 446 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 MPP3Q13368 585 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 NAA30Q147X3 362 aaPredicted RBP14.36□□□□□ -0.11
USP11-207ENST00000478596 TCEA2Q15560 299 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 C14orf28Q4W4Y0 310 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 DCAF12Q5T6F0 453 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 ATP1A1-AS1Q5TC04 95 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 IZUMO3Q5VZ72 239 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 ALG1LQ6GMV1 187 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 CAMK1DQ8IU85 385 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 PLPP6Q8IY26 295 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 NOA1Q8NC60 698 aaKnown RBP14.36□□□□□ -0.11
USP11-207ENST00000478596 PRR7Q8TB68 274 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 SLCO2A1Q92959 643 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 TSACCQ96A04 125 aaPredicted RBP14.36□□□□□ -0.11
USP11-207ENST00000478596 MARVELD3Q96A59 401 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 POM121Q96HA1 1249 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 CCDC74BQ96LY2 380 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 TEFMQ96QE5 360 aaKnown RBP14.36□□□□□ -0.11
USP11-207ENST00000478596 ADGRE3Q9BY15 652 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 LRRC40Q9H9A6 602 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 CYP4F12Q9HCS2 524 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 SLC39A1Q9NY26 324 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 PCDHGC4Q9Y5F7 938 aa14.36□□□□□ -0.11
USP11-207ENST00000478596 AKAP9Q99996 3911 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 NEMP1O14524 444 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 RFPL1O75677 317 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 SORBS2O94875 1100 aaKnown RBP14.35□□□□□ -0.11
USP11-207ENST00000478596 METTL18O95568 372 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 SLC4A1P02730 911 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 PDGFAP04085 211 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 LIMK2P53671 638 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 WNT3AP56704 352 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 TRAF2Q12933 501 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 MRPL49Q13405 166 aaKnown RBP14.35□□□□□ -0.11
USP11-207ENST00000478596 GALNT3Q14435 633 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 ZNF805Q5CZA5 627 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 UNC5BQ8IZJ1 945 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 NDUFAF2Q8N183 169 aa14.35□□□□□ -0.11
USP11-207ENST00000478596 MMGT1Q8N4V1 131 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms