RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PCDHGA6Q9Y5G7 932 aa6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 PRRC2CQ9Y520 2896 aaKnown RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 MDC1Q14676 2089 aaKnown RBP6.56□□□□□ -1.36
RTFDC1-206ENST00000477485 TEP1Q99973 2627 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 SPTBP11277 2137 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 ITPR2Q14571 2701 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 IGHV5-51A0A0C4DH38 117 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 ANKRD66B4E2M5 251 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 KRT86O43790 486 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 CPNE3O75131 537 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 SORBS2O94875 1100 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 TMEM63AO94886 807 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 CDK14O94921 469 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 DDAH2O95865 285 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 KLK3P07288 261 aaPredicted RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 CD48P09326 243 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 MYBL1P10243 752 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 SKILP12757 684 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 CES1P23141 567 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 DCTP40126 519 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 ARCN1P48444 511 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 RPL26P61254 145 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 ACY1Q03154 408 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 CDK18Q07002 472 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 NIPAL4Q0D2K0 466 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 XRCC4Q13426 336 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 PIGHQ14442 188 aaPredicted RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 HADHQ16836 314 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 FAM182AQ5T1J6 154 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 FAM69BQ5VUD6 431 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 NCBP2-AS2Q69YL0 99 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 KLHL35Q6PF15 583 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 CERS6Q6ZMG9 384 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF571Q7Z3V5 609 aaPredicted RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 RHOT1Q8IXI2 618 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 TRAM1L1Q8N609 369 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 TEX26Q8N6G2 289 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 ENDOVQ8N8Q3 282 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 KCTD6Q8NC69 237 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 GPR26Q8NDV2 337 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 FDCSPQ8NFU4 85 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 GPR150Q8NGU9 434 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 UBXN4Q92575 508 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF514Q96K75 400 aaPredicted RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 C5orf34Q96MH7 638 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF830Q96NB3 372 aaPredicted RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 MAP3K3Q99759 626 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 TIMM29Q9BSF4 260 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 NUP85Q9BW27 656 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 GPR87Q9BY21 358 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 FANCEQ9HB96 536 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 BPIFA1Q9NP55 256 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 SLC40A1Q9NP59 571 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 WASH6PQ9NQA3 447 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 IMP3Q9NV31 184 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 GPR83Q9NYM4 423 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 IP6K2Q9UHH9 426 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 RPL26L1Q9UNX3 145 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 SRPK3Q9UPE1 567 aa6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 FARSAQ9Y285 508 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 PCDHGA9Q9Y5G4 932 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 CFAP20Q9Y6A4 193 aaKnown RBP6.55□□□□□ -1.36
RTFDC1-206ENST00000477485 CROCCQ5TZA2 2017 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 RGSL1A5PLK6 1076 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 GOLGA6L3A6NEY3 463 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 GPR89AB7ZAQ6 455 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 KCNK1O00180 336 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 VEGFDO43915 354 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 CLDN1O95832 211 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 PRLP01236 227 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 JCHAINP01591 159 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 GPR89BP0CG08 455 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 GZMAP12544 262 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 BRAFP15056 766 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 FECHP22830 423 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 CCNCP24863 283 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 OTX2P32243 289 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 TNNT3P45378 269 aaPredicted RBP6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 CLCNKAP51800 687 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 SLC25A11Q02978 314 aaKnown RBP6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 GALNT2Q10471 571 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 AP1B1Q10567 949 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 GPS2Q13227 327 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 DPYSL3Q14195 570 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 KRT33BQ14525 404 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 IHHQ14623 411 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 NAA30Q147X3 362 aaPredicted RBP6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 NFKBIBQ15653 356 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 STX1AQ16623 288 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 TMTC4Q5T4D3 741 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 HGSNATQ68CP4 663 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 SLC6A19Q695T7 634 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 CCDC70Q6NSX1 233 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 FBXO38Q6PIJ6 1188 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 OOSP2Q86WS3 158 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 LRRC49Q8IUZ0 686 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 RBM12BQ8IXT5 1001 aaKnown RBP6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 IQCKQ8N0W5 287 aa6.54□□□□□ -1.36
RTFDC1-206ENST00000477485 ARRDC2Q8TBH0 407 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms