RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 FRMD8Q9BZ67 464 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-214ENST00000477152 SEMA4CQ9C0C4 833 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 POLR1EQ9GZS1 481 aaKnown RBP7.21□□□□□ -1.26
BRCA1-214ENST00000477152 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.21□□□□□ -1.26
BRCA1-214ENST00000477152 MRPL40Q9NQ50 206 aaKnown RBP7.21□□□□□ -1.26
BRCA1-214ENST00000477152 GPATCH2LQ9NWQ4 482 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 IP6K2Q9UHH9 426 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 SUFUQ9UMX1 484 aa7.21□□□□□ -1.26
BRCA1-214ENST00000477152 RGSL1A5PLK6 1076 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 A8MX80 341 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 EPHB6O15197 1021 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 PGLSO95336 258 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 ASMTLO95671 621 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 CEACAM5P06731 702 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 OR1D5P58170 312 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 RPL26P61254 145 aaKnown RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 CNGA3Q16281 694 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 DPYSL2Q16555 572 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 TBR1Q16650 682 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 YOD1Q5VVQ6 348 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 CLEC17AQ6ZS10 378 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 RBM43Q6ZSC3 357 aaKnown RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 C17orf82Q86X59 251 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 DTX1Q86Y01 620 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 ARHGAP12Q8IWW6 846 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 CACNA2D3Q8IZS8 1091 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 ADCY4Q8NFM4 1077 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 ZNF830Q96NB3 372 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 HERPUD2Q9BSE4 406 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 SUDS3Q9H7L9 328 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 SPATS2LQ9NUQ6 558 aaKnown RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 AIPL1Q9NZN9 384 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 CWC15Q9P013 229 aaKnown RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 RPL26L1Q9UNX3 145 aaKnown RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 SLC17A4Q9Y2C5 497 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 ARHGEF17Q96PE2 2063 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 IGHV5-10-1A0A0J9YXX1 117 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 B4GAT1O43505 415 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 FAM87AP0C7U9 286 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 ADCY8P40145 1251 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 SSR1P43307 286 aaKnown RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 RGRP47804 291 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 FASLGP48023 281 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 MAZP56270 477 aaKnown RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 SLC10A7Q0GE19 358 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 DPYSQ14117 519 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 MAP7Q14244 749 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 TGIF1Q15583 401 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 LINC00303Q3SY05 128 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 FOXB2Q5VYV0 432 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 WDR74Q6RFH5 385 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 KDELC2Q7Z4H8 507 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 IRF2BP2Q7Z5L9 587 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 ZSWIM9Q86XI8 627 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 FAM129CQ86XR2 697 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 HSPH1Q92598 858 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 VOPP1Q96AW1 172 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 HAUS4Q9H6D7 363 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 CAAP1Q9H8G2 361 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 PKD2L2Q9NZM6 624 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 VPS18Q9P253 973 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 MYO1AQ9UBC5 1043 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 ANAPC2Q9UJX6 822 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 PPIL1Q9Y3C6 166 aa7.2□□□□□ -1.26
BRCA1-214ENST00000477152 ZFC3H1O60293 1989 aaKnown RBP7.2□□□□□ -1.26
BRCA1-214ENST00000477152 IGHV1OR21-1A0A087WYE8 117 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 KIR2DS5A0A0G2JLQ3 304 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 A0A0G2JNG1 304 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 PMS2P1A4D2B8 440 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 LRRC53A6NM62 1247 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 GPR89AB7ZAQ6 455 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 KIR2DS3K7RE56 304 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 MYO1FO00160 1098 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 INPP4BO15327 924 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 SUV39H1O43463 412 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 RAD1O60671 282 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 LRCH4O75427 683 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 NTRK1P04629 796 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 GPR89BP0CG08 455 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 THRAP10827 490 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 CD1CP29017 333 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ETV5P41161 510 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 ETV3P41162 512 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 PRKCIP41743 596 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 TNNT3P45378 269 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 OGDHQ02218 1023 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 KCNAB2Q13303 367 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 KIR2DS5Q14953 304 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 C16orf72Q14CZ0 275 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 IFI16Q16666 785 aaKnown RBP7.19□□□□□ -1.26
BRCA1-214ENST00000477152 CA9Q16790 459 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 CCDC183Q5T5S1 534 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 CCDC70Q6NSX1 233 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 DOK6Q6PKX4 331 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 VASH2Q86V25 355 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 PLXDC1Q8IUK5 500 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 PHYKPLQ8IUZ5 450 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 NLGN4XQ8N0W4 816 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 EXD3Q8N9H8 876 aa7.19□□□□□ -1.26
BRCA1-214ENST00000477152 NLGN4YQ8NFZ3 816 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms