RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 PANX3Q96QZ0 392 aa28.46■■■□□ 2.15
VEGFA-211ENST00000476772 SPATS2LQ9NUQ6 558 aaKnown RBP28.46■■■□□ 2.15
VEGFA-211ENST00000476772 KCTD5Q9NXV2 234 aa28.46■■■□□ 2.15
VEGFA-211ENST00000476772 NDUFAB1O14561 156 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 SGTAO43765 313 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 RPS21P63220 83 aaKnown RBP28.45■■■□□ 2.15
VEGFA-211ENST00000476772 FGL2Q14314 439 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 AGERQ15109 404 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 WSCD2Q2TBF2 565 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 KIAA1161Q6NSJ0 714 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 TRIM74Q86UV6 250 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 ZBTB2Q8N680 514 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 PPP1R14CQ8TAE6 165 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 ZNF473Q8WTR7 871 aaKnown RBP28.45■■■□□ 2.15
VEGFA-211ENST00000476772 HMGB4Q8WW32 186 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 KLK6Q92876 244 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 SHDQ96IW2 340 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 FOXQ1Q9C009 403 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 NSRP1Q9H0G5 558 aaKnown RBP28.45■■■□□ 2.15
VEGFA-211ENST00000476772 IKZF3Q9UKT9 509 aa28.45■■■□□ 2.15
VEGFA-211ENST00000476772 NUMA1Q14980 2115 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 A0A1W2PQU0 124 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 KANSL1LA0AUZ9 987 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 CHURC1-FNTBB4DL54 471 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 RNGTTO60942 597 aaKnown RBP28.45■■■□□ 2.14
VEGFA-211ENST00000476772 PCCBP05166 539 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 ATP6V0D1P61421 351 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 BST1Q10588 318 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 FZD5Q13467 585 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 OR4D1Q15615 310 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 ATG16L1Q676U5 607 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 NAPRTQ6XQN6 538 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 SIX5Q8N196 739 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 TFB2MQ9H5Q4 396 aaKnown RBP28.45■■■□□ 2.14
VEGFA-211ENST00000476772 POLMQ9NP87 494 aaPredicted RBP28.45■■■□□ 2.14
VEGFA-211ENST00000476772 LATS2Q9NRM7 1088 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 OXSMQ9NWU1 459 aa28.45■■■□□ 2.14
VEGFA-211ENST00000476772 DLX3O60479 287 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 EDF1O60869 148 aaKnown RBP28.44■■■□□ 2.14
VEGFA-211ENST00000476772 AP2A2O94973 939 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 KCNC1P48547 511 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 SFSWAPQ12872 951 aaKnown RBP28.44■■■□□ 2.14
VEGFA-211ENST00000476772 TMEM115Q12893 351 aaPredicted RBP28.44■■■□□ 2.14
VEGFA-211ENST00000476772 GAS6Q14393 721 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 TMEM259Q4ZIN3 620 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 SYT13Q7L8C5 426 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 OTOAQ7RTW8 1153 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 RASGEF1AQ8N9B8 481 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 PITPNM3Q9BZ71 974 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 PREBQ9HCU5 417 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 C2orf42Q9NWW7 574 aa28.44■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3DA0A087WVF3 549 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3IA0A087WXS9 549 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3EA0A087X179 549 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3KA0A087X1G2 549 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3FA6NER0 549 aaPredicted RBP28.43■■■□□ 2.14
VEGFA-211ENST00000476772 OR2AG2A6NM03 316 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3LB9A6J9 549 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 MAGEC1O60732 1142 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3HP0C7X1 549 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 DGKEP52429 567 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3GQ6DHY5 549 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3CQ6IPX1 549 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 PNCKQ6P2M8 343 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TBC1D3Q8IZP1 549 aaPredicted RBP28.43■■■□□ 2.14
VEGFA-211ENST00000476772 KIAA1191Q96A73 305 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 LENG8Q96PV6 779 aaPredicted RBP28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TSSK1BQ9BXA7 367 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 C1QTNF2Q9BXJ5 285 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 TSR3Q9UJK0 312 aaKnown RBP28.43■■■□□ 2.14
VEGFA-211ENST00000476772 DOCK9Q9BZ29 2069 aa28.43■■■□□ 2.14
VEGFA-211ENST00000476772 NPEPPSL1A6NEC2 478 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 FAM170BA6NMN3 283 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 CDC7O00311 574 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 PAK4O96013 591 aaPredicted RBP28.42■■■□□ 2.14
VEGFA-211ENST00000476772 CCR7P32248 378 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 TPMTP51580 245 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 CTSCP53634 463 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 STX3Q13277 289 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 ACSBG2Q5FVE4 666 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 ADAMTSL4Q6UY14 1074 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 TRIM67Q6ZTA4 783 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 HORMAD1Q86X24 394 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 BEND7Q8N7W2 519 aaPredicted RBP28.42■■■□□ 2.14
VEGFA-211ENST00000476772 RHEBL1Q8TAI7 183 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 MBNL1Q9NR56 388 aaKnown RBP28.42■■■□□ 2.14
VEGFA-211ENST00000476772 NEMP2A6NFY4 417 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 BTN3A1O00481 513 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 TRIM13O60858 407 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 SERPINE1P05121 402 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 TSNQ15631 228 aaKnown RBP28.42■■■□□ 2.14
VEGFA-211ENST00000476772 LIPMQ5VYY2 423 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 CGB2Q6NT52 195 aa28.42■■■□□ 2.14
VEGFA-211ENST00000476772 PIWIL4Q7Z3Z4 852 aaKnown RBP28.42■■■□□ 2.14
VEGFA-211ENST00000476772 TP53I13Q8NBR0 393 aaPredicted RBP28.42■■■□□ 2.14
VEGFA-211ENST00000476772 PDLIM5Q96HC4 596 aaKnown RBP28.42■■■□□ 2.14
VEGFA-211ENST00000476772 DGKAP23743 735 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 ATP5F1P24539 256 aaPredicted RBP28.41■■■□□ 2.14
VEGFA-211ENST00000476772 RGS4P49798 205 aa28.41■■■□□ 2.14
VEGFA-211ENST00000476772 PPP2CBP62714 309 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms