RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 STN1Q9H668 368 aaKnown RBP4.8□□□□□ -1.64
PRKD3-208ENST00000475912 PRKRIP1Q9H875 184 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-208ENST00000475912 SLC38A10Q9HBR0 1119 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 MCM9Q9NXL9 1143 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 GDAQ9Y2T3 454 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 MYO5AQ9Y4I1 1855 aaKnown RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 SCN10AQ9Y5Y9 1956 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 C5orf67F2Z3F1 127 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 EIF3FO00303 357 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 PEX12O00623 359 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 NCAM2O15394 837 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 NDUFB10O96000 172 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 WEE2P0C1S8 567 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 TTKP33981 857 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 RPL3P39023 403 aaKnown RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 CENPAP49450 140 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 DDX10Q13206 875 aaKnown RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 KIF19Q2TAC6 998 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 ADGRD2Q7Z7M1 963 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 CUZD1Q86UP6 607 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 CHD1LQ86WJ1 897 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 DENND6AQ8IWF6 608 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 MB21D2Q8IYB1 491 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 LILRB1Q8NHL6 650 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 DNASE2BQ8WZ79 361 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 COG8Q96MW5 612 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 NAP1L4Q99733 375 aaKnown RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 PHF7Q9BWX1 381 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 LMAN2LQ9H0V9 348 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 RETREG1Q9H6L5 497 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 DDX31Q9H8H2 851 aaKnown RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 RASSF1Q9NS23 344 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 IFT80Q9P2H3 777 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 SWAP70Q9UH65 585 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 ICAM5Q9UMF0 924 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 BARX2Q9UMQ3 279 aaPredicted RBP4.79□□□□□ -1.64
PRKD3-208ENST00000475912 NAV1Q8NEY1 1877 aa4.79□□□□□ -1.64
PRKD3-208ENST00000475912 F5H6K3 240 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 J3KR12 359 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 KLK10O43240 276 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 ZBED4O75132 1171 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 ZNF432O94892 652 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 AGR2O95994 175 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 MYF6P23409 242 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 SP100P23497 879 aaPredicted RBP4.78□□□□□ -1.64
PRKD3-208ENST00000475912 DNAJB1P25685 340 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 CTNNB1P35222 781 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 KLRC3Q07444 240 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 DCAF6Q58WW2 860 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 FAM76BQ5HYJ3 339 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 FBXO47Q5MNV8 452 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 CCDC70Q6NSX1 233 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 MMS22LQ6ZRQ5 1243 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 PAF1Q8N7H5 531 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 ZMIZ2Q8NF64 920 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 DBF4BQ8NFT6 615 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 OR6J1Q8NGC5 347 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 SUSD6Q92537 303 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 TOP1MTQ969P6 601 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 CLSTN3Q9BQT9 956 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 UBA5Q9GZZ9 404 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 NOD2Q9HC29 1040 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 TXLNGQ9NUQ3 528 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 SPATS2LQ9NUQ6 558 aaKnown RBP4.78□□□□□ -1.64
PRKD3-208ENST00000475912 CYP39A1Q9NYL5 469 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 DBNLQ9UJU6 430 aaKnown RBP4.78□□□□□ -1.64
PRKD3-208ENST00000475912 SUFUQ9UMX1 484 aa4.78□□□□□ -1.64
PRKD3-208ENST00000475912 SPTBN2O15020 2390 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 ZFYVE26Q68DK2 2539 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 A0A0U1RQJ8 604 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 VWA3AA6NCI4 1184 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 RRN3P2A6NIE6 340 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 SLC16A5O15375 505 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 PI15O43692 258 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 PRKAB2O43741 272 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 LDB3O75112 727 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 CH25HO95992 272 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 MMP1P03956 469 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 CHRM4P08173 479 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 CNPP09543 421 aaKnown RBP4.77□□□□□ -1.65
PRKD3-208ENST00000475912 LIFRP42702 1097 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 NRIP1P48552 1158 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 ST3GAL1Q11201 340 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 MYBPHQ13203 477 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 ANGPT1Q15389 498 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 SF3B4Q15427 424 aaKnown RBP eCLIP4.77□□□□□ -1.65
PRKD3-208ENST00000475912 TAF12Q16514 161 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 ZNF628Q5EBL2 1059 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 CCDC158Q5M9N0 1113 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 IL20RBQ6UXL0 311 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 LURAP1LQ8IV03 231 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 CCDC105Q8IYK2 499 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 DCLK2Q8N568 766 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 VN1R2Q8NFZ6 395 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 KCNG4Q8TDN1 519 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 TMEM170AQ8WVE7 144 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 RAB40AQ8WXH6 277 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 IGSF21Q96ID5 467 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 ADGRG7Q96K78 797 aa4.77□□□□□ -1.65
PRKD3-208ENST00000475912 TBATAQ96M53 351 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms