RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 EPHX4Q8IUS5 362 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 SCFD2Q8WU76 684 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 ZNF354BQ96LW1 612 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 OR2A14Q96R47 310 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 ZHX3Q9H4I2 956 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 TRPC7Q9HCX4 862 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 PDE9AO76083 593 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 BAG4O95429 457 aaKnown RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 TFAP2AP05549 437 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 SRPRAP08240 638 aaKnown RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 NR1D1P20393 614 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 HRH2P25021 359 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 GLIPR1P48060 266 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 IKQ13123 557 aaPredicted RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 CCDC30Q5VVM6 783 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 SLC35E4Q6ICL7 350 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 TPRG1Q6ZUI0 275 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 PIWIL4Q7Z3Z4 852 aaKnown RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 KLHDC8BQ8IXV7 354 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 RBM15BQ8NDT2 890 aaKnown RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 KLHDC9Q8NEP7 349 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 OXNAD1Q96HP4 312 aaPredicted RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 TFB2MQ9H5Q4 396 aaKnown RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 EIF2B3Q9NR50 452 aaKnown RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 TRMT1Q9NXH9 659 aaKnown RBP6.03□□□□□ -1.44
SMC5-203ENST00000475540 GAB2Q9UQC2 676 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 YIPF1Q9Y548 306 aa6.03□□□□□ -1.44
SMC5-203ENST00000475540 A0A0G2JNG1 304 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 PRKNO60260 465 aaPredicted RBP6.02□□□□□ -1.45
SMC5-203ENST00000475540 GAS8-AS1O95177 125 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 BMP10O95393 424 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 KRT19P08727 400 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
SMC5-203ENST00000475540 MVPQ14764 893 aaKnown RBP6.02□□□□□ -1.45
SMC5-203ENST00000475540 KIR2DS5Q14953 304 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 MEP1AQ16819 746 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 PLXDC2Q6UX71 529 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 PACS1Q6VY07 963 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 LONP2Q86WA8 852 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 C1orf52Q8N6N3 182 aaKnown RBP6.02□□□□□ -1.45
SMC5-203ENST00000475540 CNBD1Q8NA66 436 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 PGAM5Q96HS1 289 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 GAD1Q99259 594 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 PLK3Q9H4B4 646 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 RAD21L1Q9H4I0 556 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 SEPT11Q9NVA2 429 aaKnown RBP6.02□□□□□ -1.45
SMC5-203ENST00000475540 RCC2Q9P258 522 aaKnown RBP6.02□□□□□ -1.45
SMC5-203ENST00000475540 B3GALT5Q9Y2C3 310 aa6.02□□□□□ -1.45
SMC5-203ENST00000475540 A0A1W2PPI3 338 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 PMS2P5A8MQ11 134 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 A8MZ25 164 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 H0YIN7 160 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 J3QR06 171 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 ZNF217O75362 1048 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 AMBPP02760 352 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 MCCP23508 829 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 HOXA13P31271 388 aaPredicted RBP6.01□□□□□ -1.45
SMC5-203ENST00000475540 CAMPP49913 170 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 CRIP2P52943 208 aaPredicted RBP6.01□□□□□ -1.45
SMC5-203ENST00000475540 CDH8P55286 799 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 ARF3P61204 181 aaPredicted RBP6.01□□□□□ -1.45
SMC5-203ENST00000475540 ARF1P84077 181 aaKnown RBP6.01□□□□□ -1.45
SMC5-203ENST00000475540 KIR2DS3Q14952 304 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 ZDHHC20Q5W0Z9 365 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 ADAM5Q6NVV9 412 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 FAM180BQ6P0A1 224 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 CLEC4GQ6UXB4 293 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 WDTC1Q8N5D0 677 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 ANKRD52Q8NB46 1076 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 OR10V1Q8NGI7 309 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 C1QTNF1Q9BXJ1 281 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 FTOQ9C0B1 505 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMC5-203ENST00000475540 OGFRQ9NZT2 677 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 CMAHPQ9Y471 501 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 JRKLQ9Y4A0 524 aa6.01□□□□□ -1.45
SMC5-203ENST00000475540 C5orf60A6NFR6 353 aa6□□□□□ -1.45
SMC5-203ENST00000475540 OR2C1O95371 312 aa6□□□□□ -1.45
SMC5-203ENST00000475540 CLTBP09497 229 aa6□□□□□ -1.45
SMC5-203ENST00000475540 CFC1BP0CG36 223 aa6□□□□□ -1.45
SMC5-203ENST00000475540 CFC1P0CG37 223 aa6□□□□□ -1.45
SMC5-203ENST00000475540 DCAF7P61962 342 aa6□□□□□ -1.45
SMC5-203ENST00000475540 CCDC6Q16204 474 aa6□□□□□ -1.45
SMC5-203ENST00000475540 DUOXA1Q1HG43 343 aa6□□□□□ -1.45
SMC5-203ENST00000475540 MRGPRG-AS1Q2M3A8 158 aa6□□□□□ -1.45
SMC5-203ENST00000475540 ASTE1Q2TB18 679 aaPredicted RBP6□□□□□ -1.45
SMC5-203ENST00000475540 RAB6CQ53S08 254 aa6□□□□□ -1.45
SMC5-203ENST00000475540 RARS2Q5T160 578 aaKnown RBP6□□□□□ -1.45
SMC5-203ENST00000475540 SFMBT2Q5VUG0 894 aa6□□□□□ -1.45
SMC5-203ENST00000475540 TMEM198Q66K66 360 aa6□□□□□ -1.45
SMC5-203ENST00000475540 CEACAM20Q6UY09 585 aa6□□□□□ -1.45
SMC5-203ENST00000475540 CFAP77Q6ZQR2 320 aa6□□□□□ -1.45
SMC5-203ENST00000475540 CHST9Q7L1S5 443 aa6□□□□□ -1.45
SMC5-203ENST00000475540 NEUROD6Q96NK8 337 aa6□□□□□ -1.45
SMC5-203ENST00000475540 GFI1Q99684 422 aa6□□□□□ -1.45
SMC5-203ENST00000475540 RAB6CQ9H0N0 254 aa6□□□□□ -1.45
SMC5-203ENST00000475540 NENFQ9UMX5 172 aa6□□□□□ -1.45
SMC5-203ENST00000475540 ITIH6Q6UXX5 1313 aa5.99□□□□□ -1.45
SMC5-203ENST00000475540 TMEM189-UBE2V1I3L0A0 370 aa5.99□□□□□ -1.45
SMC5-203ENST00000475540 WISP2O76076 250 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms