RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MOXD1Q6UVY6 613 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 MFSD6Q6ZSS7 791 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 C11orf57Q6ZUT1 292 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 ZNF367Q7RTV3 350 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 GCSAMQ8N6F7 178 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 Q8NFD4 153 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 WFIKKN2Q8TEU8 576 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 IGFBPL1Q8WX77 278 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 ROBO4Q8WZ75 1007 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 SLAMF9Q96A28 289 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 HES6Q96HZ4 224 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 CCDC43Q96MW1 224 aaKnown RBP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 QRFPRQ96P65 431 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 MRPL9Q9BYD2 267 aaKnown RBP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 GPR88Q9GZN0 384 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 CNOT10Q9H9A5 744 aaKnown RBP4.19□□□□□ -1.74
BRCA1-212ENST00000473961 EQTNQ9NQ60 294 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 NME7Q9Y5B8 376 aa4.19□□□□□ -1.74
BRCA1-212ENST00000473961 HTR3EA5X5Y0 456 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 WIPF3A6NGB9 483 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 C15orf62A8K5M9 175 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 B4DGG1 531 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PSMD14O00487 310 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 TIMM23O14925 209 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 BUD23O43709 281 aaKnown RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 SOX30O94993 753 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 SIX3O95343 332 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PENKP01210 267 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 FGF2P09038 288 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 CASTP20810 708 aaKnown RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 ACHEP22303 614 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 UGT1A1P22309 533 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 NMBRP28336 390 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 C21orf33P30042 268 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 CDH13P55290 713 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 TAS2R38P59533 333 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 DSC1Q08554 894 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 SPOCK1Q08629 439 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 CTTNQ14247 550 aaKnown RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 RBMS2Q15434 407 aaKnown RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 SYT16Q17RD7 645 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PRTGQ2VWP7 1150 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 AMZ1Q400G9 498 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 ATP13A5Q4VNC0 1218 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 KCNT1Q5JUK3 1230 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 TRAT1Q6PIZ9 186 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PPP1R21Q6ZMI0 780 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 Q6ZSV7 163 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 RAPH1Q70E73 1250 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 SPATA21Q7Z572 469 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 ADIPOR2Q86V24 386 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PIM3Q86V86 326 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PRIMA1Q86XR5 153 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 TIGD4Q8IY51 512 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PM20D2Q8IYS1 436 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 BEST3Q8N1M1 668 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PCDH20Q8N6Y1 951 aaKnown RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 NANOGP1Q8N7R0 232 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 SLC38A9Q8NBW4 561 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PPFIBP2Q8ND30 876 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 TBC1D16Q8TBP0 767 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 UTP15Q8TED0 518 aaKnown RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 INPP5DQ92835 1189 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 NXNL1Q96CM4 212 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 MTBPQ96DY7 904 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 GRAMD2BQ96HH9 432 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 TXNDC15Q96J42 360 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 FAM234AQ9H0X4 552 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 WNT5BQ9H1J7 359 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 GOLPH3LQ9H4A5 285 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 SEBOXQ9HB31 216 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-212ENST00000473961 PLAC1Q9HBJ0 212 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 POT1Q9NUX5 634 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 HIF1ANQ9NWT6 349 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 MCM9Q9NXL9 1143 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 HEY2Q9UBP5 337 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 LIPGQ9Y5X9 500 aa4.18□□□□□ -1.74
BRCA1-212ENST00000473961 ANKRD28O15084 1053 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 SPRY3O43610 288 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 RBMXL2O75526 392 aaKnown RBP4.17□□□□□ -1.74
BRCA1-212ENST00000473961 SERPINI2O75830 405 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 KCNK5O95279 499 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 CELA2AP08217 269 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 DNASE1P24855 282 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 PSMA3P25788 255 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 ITGB8P26012 769 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 CD38P28907 300 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 HOXD3P31249 432 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-212ENST00000473961 RBPJQ06330 500 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 LAMB3Q13751 1172 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 ZNF273Q14593 569 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 MELKQ14680 651 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 MORF4L2Q15014 288 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 FNBP1LQ5T0N5 605 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 FAM109BQ6ICB4 259 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-212ENST00000473961 LCN10Q6JVE6 187 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 RASGEF1CQ8N431 466 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 SLC5A8Q8N695 610 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 OR14A16Q8NHC5 309 aa4.17□□□□□ -1.74
BRCA1-212ENST00000473961 WDR20Q8TBZ3 569 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms