RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 FAM72BQ86X60 149 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 MCEMP1Q8IX19 187 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 SYCE1Q8N0S2 351 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 UMODL1-AS1Q8N2C9 162 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 PELI3Q8N2H9 469 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 CT55Q8WUE5 264 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 SNRNP40Q96DI7 357 aaKnown RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 DTD2Q96FN9 168 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 ZIM3Q96PE6 472 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 FCRL4Q96PJ5 515 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 SH3GL2Q99962 352 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 CINPQ9BW66 212 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 UNKQ9C0B0 810 aaKnown RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 KLC2Q9H0B6 622 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 C5AR2Q9P296 337 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 B4GALT6Q9UBX8 382 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 ZNHIT2Q9UHR6 403 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 FEZ2Q9UHY8 353 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 AJAP1Q9UKB5 411 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 INTUQ9ULD6 942 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 NFU1Q9UMS0 254 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 FARSAQ9Y285 508 aaKnown RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 PLEKHM1Q9Y4G2 1056 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 ST14Q9Y5Y6 855 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 F8P00451 2351 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 MN1Q10571 1320 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 PDZD2O15018 2839 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 A0A0A6YYK5 440 aaPredicted RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 GTPBP10A4D1E9 387 aaKnown RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 TMCO5BA8MYB1 307 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 PGRMC1O00264 195 aaKnown RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 FOXN3O00409 490 aaPredicted RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 FGF10O15520 208 aaPredicted RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 PRAMEF11O60813 436 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 CEACAM4O75871 244 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 RASSF9O75901 435 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 ASMTLO95671 621 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 LSM8O95777 96 aaKnown RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 C9P02748 559 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 PRF1P14222 555 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 LPOP22079 712 aaPredicted RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 ITGA3P26006 1051 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 ETV3P41162 512 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 SEPHS1P49903 392 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 SCNN1BP51168 640 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 RRADP55042 308 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 ITGA1P56199 1179 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 JAM2P57087 298 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 AP1S1P61966 158 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 DPTQ07507 201 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 RFTN1Q14699 578 aaPredicted RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 TTMPQ5BVD1 217 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 MED25Q71SY5 747 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 PEX26Q7Z412 305 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 C10orf67Q8IYJ2 551 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 NDUFAF2Q8N183 169 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 MREGQ8N565 214 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 Q8NA96 180 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 RXFP2Q8WXD0 754 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 NTAN1Q96AB6 310 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 ARL8AQ96BM9 186 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 C19orf60Q96EN9 201 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 ZDHHC12Q96GR4 267 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 ELMO2Q96JJ3 720 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 FAM107BQ9H098 131 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 BRD8Q9H0E9 1235 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 RASSF4Q9H2L5 321 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 NOL6Q9H6R4 1146 aaKnown RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 UCK1Q9HA47 277 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 METTL5Q9NRN9 209 aaKnown RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 AGPAT4Q9NRZ5 378 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 ASF1BQ9NVP2 202 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 GPR83Q9NYM4 423 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 LUZP4Q9P127 313 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 LCMT1Q9UIC8 334 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 DNAJC12Q9UKB3 198 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 AMFRQ9UKV5 643 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 NENFQ9UMX5 172 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 TMEM98Q9Y2Y6 226 aa8.79□□□□□ -1
SYNGAP1-205ENST00000470232 COPG1Q9Y678 874 aaKnown RBP8.79□□□□□ -1
SYNGAP1-205ENST00000470232 ESYT3A0FGR9 886 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 LILRA5A6NI73 299 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CCDC188H7C350 402 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 J3KR12 359 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 DDX3XO00571 662 aaKnown RBP eCLIP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 TRAFD1O14545 582 aaPredicted RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CREB3O43889 395 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 UBXN7O94888 489 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 FAM153BP0C7A2 387 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CCDC172P0C7W6 258 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CYP11B1P15538 503 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 HTR7P34969 479 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 SOX5P35711 763 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 PTPN9P43378 593 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 SH3BP2P78314 561 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CDK18Q07002 472 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CHAF1BQ13112 559 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CUL1Q13616 776 aa8.78□□□□□ -1
SYNGAP1-205ENST00000470232 ZRSR2Q15696 482 aaKnown RBP8.78□□□□□ -1
SYNGAP1-205ENST00000470232 CNGA3Q16281 694 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms