RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ARF3P61204 181 aaPredicted RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 ARF1P84077 181 aaKnown RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 RUNX1T1Q06455 604 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 DMP1Q13316 513 aaPredicted RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 ACVR2BQ13705 512 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 MEA1Q16626 185 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 CCNYL2Q5T2Q4 361 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 PMS2CLQ68D20 193 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 JADE1Q6IE81 842 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 MARK2Q7KZI7 788 aaKnown RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 ATG9AQ7Z3C6 839 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 CTAGE4Q8IX94 777 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 RASGEF1CQ8N431 466 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 SLC5A8Q8N695 610 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 HJURPQ8NCD3 748 aaPredicted RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 RDM1Q8NG50 284 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 TRPC4APQ8TEL6 797 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 SCFD2Q8WU76 684 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 ALG14Q96F25 216 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 SCRN2Q96FV2 425 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 SETD4Q9NVD3 440 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 NSMCE4AQ9NXX6 385 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 MDFICQ9P1T7 246 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 DBNLQ9UJU6 430 aaKnown RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 TCF19Q9Y242 345 aa3.76□□□□□ -1.81
BRCA2-202ENST00000470094 TMEM184BQ9Y519 407 aaPredicted RBP3.76□□□□□ -1.81
BRCA2-202ENST00000470094 FRMD3A2A2Y4 597 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 ZNF500O60304 480 aaPredicted RBP3.75□□□□□ -1.81
BRCA2-202ENST00000470094 TMCC2O75069 709 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 SOCS5O75159 536 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 PDE9AO76083 593 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 SRPRAP08240 638 aaKnown RBP3.75□□□□□ -1.81
BRCA2-202ENST00000470094 CSF2RAP15509 400 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 ACADLP28330 430 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 MSH2P43246 934 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 CAMPP49913 170 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 CTSCP53634 463 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 CDH8P55286 799 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 RPL24P83731 157 aaKnown RBP3.75□□□□□ -1.81
BRCA2-202ENST00000470094 ASTE1Q2TB18 679 aaPredicted RBP3.75□□□□□ -1.81
BRCA2-202ENST00000470094 FAM205BPQ63HN1 556 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 Q75L30 129 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 WDTC1Q8N5D0 677 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 GCSAMQ8N6F7 178 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 SLC38A9Q8NBW4 561 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 GSDMBQ8TAX9 411 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 ABHD8Q96I13 439 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 RSRC1Q96IZ7 334 aaKnown RBP3.75□□□□□ -1.81
BRCA2-202ENST00000470094 ST6GAL2Q96JF0 529 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 SERINC2Q96SA4 455 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 PLK3Q9H4B4 646 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 EIF2B3Q9NR50 452 aaKnown RBP3.75□□□□□ -1.81
BRCA2-202ENST00000470094 KLHL9Q9P2J3 617 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 GPR34Q9UPC5 381 aa3.75□□□□□ -1.81
BRCA2-202ENST00000470094 C15orf62A8K5M9 175 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 ZBTB43O43298 467 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 PLPP2O43688 288 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 GM2AP17900 193 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 HRH2P25021 359 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
BRCA2-202ENST00000470094 NUCB1Q02818 461 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 IKQ13123 557 aaPredicted RBP3.74□□□□□ -1.81
BRCA2-202ENST00000470094 MVPQ14764 893 aaKnown RBP3.74□□□□□ -1.81
BRCA2-202ENST00000470094 ASPRV1Q53RT3 343 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 PLA2G4FQ68DD2 849 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 GSG1LQ6UXU4 331 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 CFAP77Q6ZQR2 320 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 PRAG1Q86YV5 1406 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 EPHX4Q8IUS5 362 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 C1orf52Q8N6N3 182 aaKnown RBP3.74□□□□□ -1.81
BRCA2-202ENST00000470094 FBXO17Q96EF6 278 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 OXNAD1Q96HP4 312 aaPredicted RBP3.74□□□□□ -1.81
BRCA2-202ENST00000470094 PGAM5Q96HS1 289 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 ZNF354BQ96LW1 612 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 TIGD1Q96MW7 591 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 PGLYRP2Q96PD5 576 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 OR2A14Q96R47 310 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 GAD1Q99259 594 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 NUDT16L1Q9BRJ7 211 aaKnown RBP3.74□□□□□ -1.81
BRCA2-202ENST00000470094 C1QTNF1Q9BXJ1 281 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 FTOQ9C0B1 505 aaKnown RBP eCLIP3.74□□□□□ -1.81
BRCA2-202ENST00000470094 TRPC7Q9HCX4 862 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 SEPT11Q9NVA2 429 aaKnown RBP3.74□□□□□ -1.81
BRCA2-202ENST00000470094 OGFRQ9NZT2 677 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 CMAHPQ9Y471 501 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 RUSC2Q8N2Y8 1516 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 ARHGEF40Q8TER5 1519 aa3.74□□□□□ -1.81
BRCA2-202ENST00000470094 KIF26BQ2KJY2 2108 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 TCERG1O14776 1098 aaKnown RBP3.73□□□□□ -1.81
BRCA2-202ENST00000470094 DOK2O60496 412 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 CTSVO60911 334 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 ZNF217O75362 1048 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 RB1P06400 928 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 CLTBP09497 229 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 PAX1P15863 534 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 MCCP23508 829 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 HOXA13P31271 388 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-202ENST00000470094 LINC01547P58512 204 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-202ENST00000470094 MEP1AQ16819 746 aa3.73□□□□□ -1.81
BRCA2-202ENST00000470094 ZDHHC20Q5W0Z9 365 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms