RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ABRAXAS1Q6UWZ7 409 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 MED25Q71SY5 747 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 POLNQ7Z5Q5 900 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 ADGRG6Q86SQ4 1221 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 TEX26Q8N6G2 289 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 TMEM102Q8N9M5 508 aaPredicted RBP18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 SGSM3Q96HU1 749 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 CSPG4P5Q96PW8 444 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 MAP3K3Q99759 626 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 RAB33BQ9H082 229 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 ILKAPQ9H0C8 392 aaPredicted RBP18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 KCND1Q9NSA2 647 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 RBM22Q9NW64 420 aaKnown RBP eCLIP18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 ADGRG1Q9Y653 693 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 COPG1Q9Y678 874 aaKnown RBP18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 APCP25054 2843 aa18.58■□□□□ 0.57
NCKIPSD-209ENST00000470006 JCHAINP01591 159 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 SLC4A1P02730 911 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 CCDC172P0C7W6 258 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 PRF1P14222 555 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 BRAFP15056 766 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 VCLP18206 1134 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZNF165P49910 485 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 RPL26P61254 145 aaKnown RBP18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 GPR19Q15760 415 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 DPYSL2Q16555 572 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 LYPLAL1Q5VWZ2 237 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 IZUMO3Q5VZ72 239 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 PLEKHA7Q6IQ23 1121 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 PPP1R2P3Q6NXS1 205 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 ADAMTS17Q8TE56 1095 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 CLIP3Q96DZ5 547 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 RANBP9Q96S59 729 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 SMAD5Q99717 465 aaKnown RBP18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 TIMM29Q9BSF4 260 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 DTLQ9NZJ0 730 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 TCFL5Q9UL49 500 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 RPL26L1Q9UNX3 145 aaKnown RBP18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 B3GNT3Q9Y2A9 372 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 MDC1Q14676 2089 aaKnown RBP18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 PIKFYVEQ9Y2I7 2098 aa18.58■□□□□ 0.56
NCKIPSD-209ENST00000470006 MTX2O75431 263 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 PRLP01236 227 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 ATP1A3P13637 1013 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 GLRBP48167 497 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 GSDMDP57764 484 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 TUBB4BP68371 445 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 HSD11B2P80365 405 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 TUBB2AQ13885 445 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 IHHQ14623 411 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 BOLA3Q53S33 107 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 TMTC4Q5T4D3 741 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 HGSNATQ68CP4 663 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 GLIS1Q8NBF1 620 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 LYSMD1Q96S90 227 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZSCAN5AQ9BUG6 496 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 TUBB2BQ9BVA1 445 aa18.57■□□□□ 0.56
NCKIPSD-209ENST00000470006 CROCCQ5TZA2 2017 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 CHUKO15111 745 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 CDK14O94921 469 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 FERP16591 822 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 FECHP22830 423 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 IL1R2P27930 398 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 GRNP28799 593 aaKnown RBP18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 HNRNPH3P31942 346 aaKnown RBP18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 PER3P56645 1201 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 UBE2HP62256 183 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 ATP1A4Q13733 1029 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 BECN1Q14457 450 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 QPCTQ16769 361 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 CCDC122Q5T0U0 273 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 VWA5B1Q5TIE3 1220 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 AGAP9Q5VTM2 703 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 LCN10Q6JVE6 187 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 KMT5CQ86Y97 462 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 LRRC49Q8IUZ0 686 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 GLYATL1Q969I3 302 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 NLNQ9BYT8 704 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 UNKQ9C0B0 810 aaKnown RBP18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 RUBCNLQ9H714 662 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZFYVE1Q9HBF4 777 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 SOHLH2Q9NX45 425 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 C5AR2Q9P296 337 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 ENTPD4Q9Y227 616 aa18.56■□□□□ 0.56
NCKIPSD-209ENST00000470006 TLCD2A6NGC4 264 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 ANKRD66B4E2M5 251 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 MEN1O00255 615 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 LRRTM2O43300 516 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 ALPPP05187 535 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 RAB40ALP0C0E4 278 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 KRT81Q14533 505 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 PRAMEF17Q5VTA0 474 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 SP5Q6BEB4 398 aaPredicted RBP18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 TIGD7Q6NT04 549 aaPredicted RBP18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 ARMC6Q6NXE6 501 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 WASH2PQ6VEQ5 465 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 TRAPPC5Q8IUR0 188 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 D2HGDHQ8N465 521 aa18.55■□□□□ 0.56
NCKIPSD-209ENST00000470006 ZBTB2Q8N680 514 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms