RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TUBGCP3Q96CW5 907 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 RADILQ96JH8 1075 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SERAC1Q96JX3 654 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 HYLS1Q96M11 299 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ZSWIM3Q96MP5 696 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 QKIQ96PU8 341 aaKnown RBP eCLIP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 LENG8Q96PV6 779 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CYP2S1Q96SQ9 504 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 MNTQ99583 582 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 GDF15Q99988 308 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SLC25A23Q9BV35 468 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 FUNDC2Q9BWH2 189 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 FTHL17Q9BXU8 183 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 LRRC3Q9BY71 257 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 SLC6A17Q9H1V8 727 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TMEM245Q9H330 911 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 NARFLQ9H6Q4 476 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ARMT1Q9H993 441 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ERVMER34-1Q9H9K5 563 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CAB39LQ9H9S4 337 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 UCK1Q9HA47 277 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ZBTB26Q9HCK0 441 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 AGPAT4Q9NRZ5 378 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PAK5Q9P286 719 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 DNMT3BQ9UBC3 853 aaKnown RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 EVLQ9UI08 416 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF639Q9UID6 485 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 NOCTQ9UK39 431 aaKnown RBP4.82□□□□□ -1.64
SF3B1-207ENST00000468925 GMEB2Q9UKD1 530 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TRHDEQ9UKU6 1024 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 ZBTB21Q9ULJ3 1066 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 STAP1Q9ULZ2 295 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CDYLQ9Y232 598 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PDE10AQ9Y233 779 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 NDUFAF1Q9Y375 327 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 PRELID3BQ9Y3B1 194 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TPRKBQ9Y3C4 175 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 RAP2CQ9Y3L5 183 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 FKBP7Q9Y680 259 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 TEX264Q9Y6I9 313 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 CAMTA1Q9Y6Y1 1673 aa4.82□□□□□ -1.64
SF3B1-207ENST00000468925 LOC100653049A0A140TA62 436 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 A0A1B0GW55 424 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TCRBV9S1A1TA0A576 114 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DHRS12A0PJE2 317 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FAM159BA6NKW6 160 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 KRBOX1C9JBD0 128 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 E5RJQ4 531 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF195O14628 629 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 GABRDO14764 452 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SLC30A4O14863 429 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 NKRFO15226 690 aaKnown RBP eCLIP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 GPR39O43194 453 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PLIN3O60664 434 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TSC22D2O75157 780 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TULP3O75386 442 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 KRT34O76011 436 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 APOL3O95236 402 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SNAP29O95721 258 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 HSPA4LO95757 839 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 IFNA7P01567 189 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 MPOP05164 745 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ITGB1P05556 798 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CALB1P05937 261 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 RETP07949 1114 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TMEM191BP0C7N4 346 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DUX4L2P0CJ85 424 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DUX4L3P0CJ86 424 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DUX4L4P0CJ87 422 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DUX4L5P0CJ88 424 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DUX4L6P0CJ89 424 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DUX4L7P0CJ90 424 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 KITP10721 976 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DBTP11182 482 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FGF3P11487 239 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PSKH1P11801 424 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 MLNP12872 115 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 HSD17B1P14061 328 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CYP11B1P15538 503 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PHKG2P15735 406 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TCF4P15884 667 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF3P17036 446 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CRHBPP24387 322 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ADORA1P30542 326 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SSTR1P30872 391 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CYP2C18P33260 490 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 EVI2BP34910 448 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 RYKP34925 604 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SOX6P35712 828 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 POLD2P49005 469 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CLCNKBP51801 687 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ADCY7P51828 1080 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 KPNA2P52292 529 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SLC12A3P55017 1021 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CDH15P55291 814 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 GPR85P60893 370 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PSME3P61289 254 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ERVK-21P61565 698 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 MRPS5P82675 430 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 GCNT1Q02742 428 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms