RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 UAP1L1Q3KQV9 507 aa18.84■□□□□ 0.61
PCCB-208ENST00000468777 GPR33Q49SQ1 333 aa18.84■□□□□ 0.61
PCCB-208ENST00000468777 PRRT3Q5FWE3 981 aa18.84■□□□□ 0.61
PCCB-208ENST00000468777 KIAA0930Q6ICG6 404 aaPredicted RBP18.84■□□□□ 0.61
PCCB-208ENST00000468777 DET1Q7L5Y6 550 aa18.84■□□□□ 0.61
PCCB-208ENST00000468777 ALYREFQ86V81 257 aaKnown RBP18.84■□□□□ 0.61
PCCB-208ENST00000468777 PALM2Q8IXS6 379 aa18.84■□□□□ 0.61
PCCB-208ENST00000468777 TM7SF3Q9NS93 570 aa18.84■□□□□ 0.61
PCCB-208ENST00000468777 NOVA2Q9UNW9 492 aaKnown RBP18.84■□□□□ 0.61
PCCB-208ENST00000468777 TNFRSF10CO14798 259 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 DNAJC6O75061 913 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 CDK14O94921 469 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 RASGRP1O95267 797 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 EPHA8P29322 1005 aaPredicted RBP18.83■□□□□ 0.6
PCCB-208ENST00000468777 PHBP35232 272 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 RXRGP48443 463 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 CCT8P50990 548 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 B4GALNT1Q00973 533 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 FASTKD1Q53R41 847 aaKnown RBP18.83■□□□□ 0.6
PCCB-208ENST00000468777 LDLRAP1Q5SW96 308 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 UNC5AQ6ZN44 842 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 CAPN12Q6ZSI9 719 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 OXR1Q8N573 874 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 OTUD6BQ8N6M0 293 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 LRRC61Q9BV99 259 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 SLC13A1Q9BZW2 595 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 TMEM168Q9H0V1 697 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 CATSPERZQ9NTU4 200 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 ZNHIT2Q9UHR6 403 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 PLEKHM1Q9Y4G2 1056 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 DGKBQ9Y6T7 804 aa18.83■□□□□ 0.6
PCCB-208ENST00000468777 OR2AG2A6NM03 316 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 CD3EAPO15446 510 aaKnown RBP18.82■□□□□ 0.6
PCCB-208ENST00000468777 PIAS2O75928 621 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 PAMP19021 973 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 GPX6P59796 221 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 HNRNPKP61978 463 aaKnown RBP eCLIP18.82■□□□□ 0.6
PCCB-208ENST00000468777 GABPB1Q06547 395 aaPredicted RBP18.82■□□□□ 0.6
PCCB-208ENST00000468777 DBN1Q16643 649 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 CRTC3Q6UUV7 619 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 C3orf62Q6ZUJ4 267 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 RASGEF1AQ8N9B8 481 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.82■□□□□ 0.6
PCCB-208ENST00000468777 ZNF548Q8NEK5 533 aaPredicted RBP18.82■□□□□ 0.6
PCCB-208ENST00000468777 CCL4L1Q8NHW4 92 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 ULK4Q96C45 1275 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 LRRC39Q96DD0 335 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 COPS8Q99627 209 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 GPSM3Q9Y4H4 160 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 ARID1BQ8NFD5 2236 aaPredicted RBP18.82■□□□□ 0.6
PCCB-208ENST00000468777 PIKFYVEQ9Y2I7 2098 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 NUAK1O60285 661 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 TNFP01375 233 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 NR1D1P20393 614 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 MSH3P20585 1137 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 DGKAP23743 735 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 SSTR1P30872 391 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 CTSCP53634 463 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 PLA2G4EQ3MJ16 856 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 ARMC3Q5W041 872 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 LMX1AQ8TE12 382 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 SAP25Q8TEE9 199 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 TLCD1Q96CP7 247 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 SGF29Q96ES7 293 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 NAT9Q9BTE0 207 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 STMN4Q9H169 189 aaPredicted RBP18.82■□□□□ 0.6
PCCB-208ENST00000468777 C20orf96Q9NUD7 363 aaPredicted RBP18.82■□□□□ 0.6
PCCB-208ENST00000468777 DNAAF2Q9NVR5 837 aaKnown RBP18.82■□□□□ 0.6
PCCB-208ENST00000468777 ST14Q9Y5Y6 855 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 FAM169AQ9Y6X4 670 aa18.82■□□□□ 0.6
PCCB-208ENST00000468777 ZFC3H1O60293 1989 aaKnown RBP18.81■□□□□ 0.6
PCCB-208ENST00000468777 EXOC1LA0A1B0GW35 172 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 H3BM21 787 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 OR1I1O60431 355 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 CTSEP14091 401 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 BLKP51451 505 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 MAGOHP61326 146 aaKnown RBP18.81■□□□□ 0.6
PCCB-208ENST00000468777 PYCR3Q53H96 274 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 STPG1Q5TH74 334 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 CHST15Q7LFX5 561 aaPredicted RBP18.81■□□□□ 0.6
PCCB-208ENST00000468777 GALNT13Q8IUC8 556 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 TRAPPC5Q8IUR0 188 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 ZNF547Q8IVP9 402 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 SLC25A45Q8N413 288 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 CLDN19Q8N6F1 224 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 SCARF2Q96GP6 870 aaPredicted RBP18.81■□□□□ 0.6
PCCB-208ENST00000468777 CLPBQ9H078 707 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 ZDHHC3Q9NYG2 299 aa18.81■□□□□ 0.6
PCCB-208ENST00000468777 GRID2O43424 1007 aa18.8■□□□□ 0.6
PCCB-208ENST00000468777 VEGFDO43915 354 aa18.8■□□□□ 0.6
PCCB-208ENST00000468777 DFNA5O60443 496 aa18.8■□□□□ 0.6
PCCB-208ENST00000468777 FOXD2O60548 495 aaPredicted RBP18.8■□□□□ 0.6
PCCB-208ENST00000468777 ERVK-10P10266 1014 aa18.8■□□□□ 0.6
PCCB-208ENST00000468777 TRMT10BQ6PF06 316 aaKnown RBP18.8■□□□□ 0.6
PCCB-208ENST00000468777 BEND7Q8N7W2 519 aaPredicted RBP18.8■□□□□ 0.6
PCCB-208ENST00000468777 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.8■□□□□ 0.6
PCCB-208ENST00000468777 SGSM3Q96HU1 749 aa18.8■□□□□ 0.6
PCCB-208ENST00000468777 ARHGEF17Q96PE2 2063 aaPredicted RBP18.8■□□□□ 0.6
PCCB-208ENST00000468777 GOLGA4Q13439 2230 aaKnown RBP18.8■□□□□ 0.6
PCCB-208ENST00000468777 CHUKO15111 745 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 771 ms