RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 KIF1CO43896 1103 aaKnown RBP16.96■□□□□ 0.31
TRIM56-203ENST00000467847 PMPCBO75439 489 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 KIAA0754O94854 1291 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 NDUFA10O95299 355 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 TPM3P06753 285 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 ARHGAP25P42331 645 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 FOXK1P85037 733 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 GTF2H3Q13889 308 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 IGFBP7Q16270 282 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 ASTE1Q2TB18 679 aaPredicted RBP16.96■□□□□ 0.31
TRIM56-203ENST00000467847 LACTB2Q53H82 288 aaPredicted RBP16.96■□□□□ 0.31
TRIM56-203ENST00000467847 CACHD1Q5VU97 1274 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 IRGCQ6NXR0 463 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 WASH2PQ6VEQ5 465 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 FAM92BQ6ZTR7 304 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 PRSS42Q7Z5A4 293 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 RBM12BQ8IXT5 1001 aaKnown RBP16.96■□□□□ 0.31
TRIM56-203ENST00000467847 ZDHHC12Q96GR4 267 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 WASH6PQ9NQA3 447 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 UBP1Q9NZI7 540 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 TMPRSS11EQ9UL52 423 aa16.96■□□□□ 0.31
TRIM56-203ENST00000467847 AKR1B10O60218 316 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 TMEM115Q12893 351 aaPredicted RBP16.95■□□□□ 0.3
TRIM56-203ENST00000467847 ATP13A5Q4VNC0 1218 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 C4orf17Q53FE4 359 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 TEX44Q53QW1 395 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 C11orf96Q7Z7L8 435 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 OR8K1Q8NGG5 319 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 RNF25Q96BH1 459 aaPredicted RBP16.95■□□□□ 0.3
TRIM56-203ENST00000467847 TTC25Q96NG3 672 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 DNAJC7Q99615 494 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 XPO4Q9C0E2 1151 aaKnown RBP16.95■□□□□ 0.3
TRIM56-203ENST00000467847 ZNHIT6Q9NWK9 470 aaKnown RBP16.95■□□□□ 0.3
TRIM56-203ENST00000467847 LNPEPQ9UIQ6 1025 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 KCNMB2Q9Y691 235 aa16.95■□□□□ 0.3
TRIM56-203ENST00000467847 SSU72P8A0A1W2PR75 194 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 KATNA1O75449 491 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 CCNYL3P0C7X3 344 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 FGF5P12034 268 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 TNNT1P13805 278 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 PTPN3P26045 913 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 HALP42357 657 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 ERV3-1Q14264 604 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 LRRC38Q5VT99 294 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 PPP1R3BQ86XI6 285 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 BRSK1Q8TDC3 778 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 KLHL6Q8WZ60 621 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 TEKT5Q96M29 485 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 KCND3Q9UK17 655 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 TP53TG5Q9Y2B4 290 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 WDR37Q9Y2I8 494 aa16.94■□□□□ 0.3
TRIM56-203ENST00000467847 MKRN2OSH3BPM6 223 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 SPAG6O75602 509 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 NELFEP18615 380 aaKnown RBP16.93■□□□□ 0.3
TRIM56-203ENST00000467847 HMGCLP35914 325 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 TNNT3P45378 269 aaPredicted RBP16.93■□□□□ 0.3
TRIM56-203ENST00000467847 PRKD1Q15139 912 aaPredicted RBP16.93■□□□□ 0.3
TRIM56-203ENST00000467847 NOMO1Q15155 1222 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRIM56-203ENST00000467847 CYB5D1Q6P9G0 228 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 RHOT2Q8IXI1 618 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 RHOT1Q8IXI2 618 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 TFB1MQ8WVM0 346 aaKnown RBP16.93■□□□□ 0.3
TRIM56-203ENST00000467847 ZCCHC2Q9C0B9 1178 aaKnown RBP16.93■□□□□ 0.3
TRIM56-203ENST00000467847 RAB33BQ9H082 229 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 TRABDQ9H4I3 376 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 PDE7BQ9NP56 450 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 IL26Q9NPH9 171 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 SPTLC3Q9NUV7 552 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 DDX56Q9NY93 547 aaKnown RBP16.93■□□□□ 0.3
TRIM56-203ENST00000467847 SAE1Q9UBE0 346 aaPredicted RBP16.93■□□□□ 0.3
TRIM56-203ENST00000467847 EPHA6Q9UF33 1036 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 FAM153AQ9UHL3 310 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 POLHQ9Y253 713 aa16.93■□□□□ 0.3
TRIM56-203ENST00000467847 MYO9AB2RTY4 2548 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 CDC14CA4D256 554 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 GOLGA6L3A6NEY3 463 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 KCNJ13O60928 360 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 MT-ND3P03897 115 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 FURINP09958 794 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 FECHP22830 423 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 SPAM1P38567 509 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 NR2C2P49116 596 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 WNT3AP56704 352 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 PPP1CAP62136 330 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 KLRB1Q12918 225 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 TRIM14Q14142 442 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 PPP2R5EQ16537 467 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 SIRPB2Q5JXA9 342 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 ZDHHC20Q5W0Z9 365 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 MFSD7Q6UXD7 560 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 FAM151BQ6UXP7 276 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 BZW1Q7L1Q6 419 aaKnown RBP16.92■□□□□ 0.3
TRIM56-203ENST00000467847 AMZ2Q86W34 360 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 SLC25A41Q8N5S1 370 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 ANP32EQ9BTT0 268 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 TWSG1Q9GZX9 223 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 PADI1Q9ULC6 663 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 HYOU1Q9Y4L1 999 aa16.92■□□□□ 0.3
TRIM56-203ENST00000467847 USP9XQ93008 2570 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms