RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	LZTS3	O60299	673 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	RECQL5	O94762	991 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	PDHA1	P08559	390 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	GP5	P40197	560 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	PRAME	P78395	509 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	CRADD	P78560	199 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	SEMG2	Q02383	582 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	PPARD	Q03181	441 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	MTM1	Q13496	603 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	OLIG2	Q13516	323 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	THOC5	Q13769	683 aa	Known RBP	11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	SEPT6	Q14141	434 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	GALNT3	Q14435	633 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	INPP5A	Q14642	412 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	RTP5	Q14D33	572 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	TUBB8	Q3ZCM7	444 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	FAM182A	Q5T1J6	154 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	GRTP1	Q5TC63	336 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	CDCP2	Q5VXM1	449 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	KDELC2	Q7Z4H8	507 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	KCNMB4	Q86W47	210 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	CTAGE3P	Q8IX95	158 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	OR2W6P	Q8NHA6	318 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	DTX3L	Q8TDB6	740 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	ALKBH8	Q96BT7	664 aa	Known RBP	11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	MFSD3	Q96ES6	412 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	PAFAH2	Q99487	392 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	APOO	Q9BUR5	198 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	LRRC61	Q9BV99	259 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	SLC13A1	Q9BZW2	595 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	NRSN2	Q9GZP1	204 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	KCTD5	Q9NXV2	234 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	CLCA2	Q9UQC9	943 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	VPS9D1	Q9Y2B5	631 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	PKP3	Q9Y446	797 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	PKD1L2	Q7Z442	2459 aa		11.95	□□□□□ -0.5
CTNS-205	ENST00000467663	ZZEF1	O43149	2961 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	KNTC1	P50748	2209 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	GOLGA4	Q13439	2230 aa	Known RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	CHD6	Q8TD26	2715 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	LMO7DN	F2Z398	122 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	PSMD11	O00231	422 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	STX7	O15400	261 aa	Known RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	MT-CO3	P00414	261 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	C1QA	P02745	245 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	SNRPA	P09012	282 aa	Known RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	ELFN1	P0C7U0	828 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	MYF5	P13349	255 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	GM2A	P17900	193 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	OGN	P20774	298 aa	Known RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	HTR1B	P28222	390 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	NMBR	P28336	390 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	SPR	P35270	261 aa	Predicted RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	PPARG	P37231	505 aa	Predicted RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	BLK	P51451	505 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	HK3	P52790	923 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	C1orf61	Q13536	156 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	NFATC4	Q14934	902 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	CNGA3	Q16281	694 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	ALG11	Q2TAA5	492 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	DEFB133	Q30KQ1	61 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	PRRT3	Q5FWE3	981 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	MRNIP	Q6NTE8	343 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	ESRP1	Q6NXG1	681 aa	Known RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	AFTPH	Q6ULP2	937 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	CAPN12	Q6ZSI9	719 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	PPM1N	Q8N819	430 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	GPR150	Q8NGU9	434 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	UHMK1	Q8TAS1	419 aa	Known RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	EPS8L3	Q8TE67	593 aa	Known RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	NXPE2	Q96DL1	559 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	FCRL3	Q96P31	734 aa	Predicted RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	TCF12	Q99081	682 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	TTC1	Q99614	292 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	BOC	Q9BWV1	1114 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	GPR63	Q9BZJ6	419 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	CLPB	Q9H078	707 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	ZFYVE1	Q9HBF4	777 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	PLAC1	Q9HBJ0	212 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	PPAN	Q9NQ55	473 aa	Known RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	PIH1D1	Q9NWS0	290 aa	Known RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	B4GALT6	Q9UBX8	382 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	APPL1	Q9UKG1	709 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	RAX	Q9Y2V3	346 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	ZNF711	Q9Y462	761 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	GPSM3	Q9Y4H4	160 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	OR1A2	Q9Y585	309 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	SCN8A	Q9UQD0	1980 aa		11.94	□□□□□ -0.5
CTNS-205	ENST00000467663	DMXL2	Q8TDJ6	3036 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	EME2	A4GXA9	379 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	YY2	O15391	372 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	RASGRP1	O95267	797 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	PCCB	P05166	539 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	ANXA6	P08133	673 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	HOXC4	P09017	264 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	TRIM23	P36406	574 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	ARCN1	P48444	511 aa	Known RBP	11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms