RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 VEGFDO43915 354 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 SRP72O76094 671 aaKnown RBP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 GAS8O95995 478 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 GLB1P16278 677 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 RPL10P27635 214 aaKnown RBP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 PAFAH1B1P43034 410 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 CDKN1CP49918 316 aaPredicted RBP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 ZNF140P52738 457 aaPredicted RBP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 CTSCP53634 463 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 DRG2P55039 364 aaKnown RBP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 OR1D5P58170 312 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 GABREP78334 506 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 CDH17Q12864 832 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 PEX6Q13608 980 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 ISXQ2M1V0 245 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 LDLRAP1Q5SW96 308 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 CERCAMQ5T4B2 595 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 OGFOD3Q6PK18 319 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 TMEM220Q6QAJ8 160 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 SPRED1Q7Z699 444 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 B3GNT8Q7Z7M8 397 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 LINC00523Q86TU6 105 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 DCBLD1Q8N8Z6 715 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 PRELID2Q8N945 189 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 NXPE2Q96DL1 559 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 CCDC97Q96F63 343 aaPredicted RBP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 ATXN7L3BQ96GX2 97 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 PBKQ96KB5 322 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 CAPZA3Q96KX2 299 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 OSBPL9Q96SU4 736 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 ZCCHC2Q9C0B9 1178 aaKnown RBP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 RMI1Q9H9A7 625 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 MED4Q9NPJ6 270 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 PRDM8Q9NQV8 689 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 SLC23A2Q9UGH3 650 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 APPL1Q9UKG1 709 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 ENTPD2Q9Y5L3 495 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 WDFY3Q8IZQ1 3526 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 PMS2P1A4D2B8 440 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 OR51F1A6NGY5 319 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 D6RAR5 112 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 PGRMC1O00264 195 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 KMOO15229 486 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 PPM1DO15297 605 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 LDB2O43679 373 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 ZNF7P17097 686 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 ITGALP20701 1170 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 MPSTP25325 297 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 HADHAP40939 763 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 SESN2P58004 480 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 XIAPP98170 497 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 PDE1BQ01064 536 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 HHEXQ03014 270 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 MSLNQ13421 630 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 SEMA5AQ13591 1074 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 LRP8Q14114 963 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 GLE1Q53GS7 698 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 FNBP1LQ5T0N5 605 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 PHF19Q5T6S3 580 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 CDCP2Q5VXM1 449 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 NKAIN2Q5VXU1 208 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 USP53Q70EK8 1073 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 TAS2R42Q7RTR8 314 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 LAPTM4BQ86VI4 370 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 ZNF547Q8IVP9 402 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 TRIM48Q8IWZ4 208 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 KLHDC8BQ8IXV7 354 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 RASGEF1CQ8N431 466 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 RASGEF1AQ8N9B8 481 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 DDHD1Q8NEL9 900 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 OR6C4Q8NGE1 309 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 COG1Q8WTW3 980 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 MAGOHBQ96A72 148 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 SGF29Q96ES7 293 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 AHCYL2Q96HN2 611 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 NAF1Q96HR8 494 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 SLC38A3Q99624 504 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 PARD6BQ9BYG5 372 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 STN1Q9H668 368 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 ARNT2Q9HBZ2 717 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 KCNK4Q9NYG8 393 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 FEZ2Q9UHY8 353 aaPredicted RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 PSMD13Q9UNM6 376 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 SATB2Q9UPW6 733 aa9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 MAP1BP46821 2468 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-205ENST00000466260 PRAMEF33A0A0G2JMD5 474 aa9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 TCRBV7S3A2A0A539 114 aa9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 TMEM8BA6NDV4 472 aa9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 NTN3O00634 580 aaPredicted RBP9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 CES2O00748 559 aa9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 CHUKO15111 745 aa9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 NUDT21O43809 227 aaKnown RBP9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 BRINP1O60477 761 aa9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 PPFIA2O75334 1257 aa9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 KRT14P02533 472 aa9.58□□□□□ -0.88
RTFDC1-205ENST00000466260 F3P13726 295 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms