RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SATB2Q9UPW6 733 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 NCKAP1Q9Y2A7 1128 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 USP9YO00507 2555 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-215ENST00000465457 NOTCH2Q04721 2471 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 LY6G6EA0A0G2JKS1 128 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 HMX2A2RU54 273 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 MROH6A6NGR9 719 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 LRRC72A6NJI9 287 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 ZMPSTE24O75844 475 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 KIAA0754O94854 1291 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 CRTAMO95727 393 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 GIMD1P0DJR0 217 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 TYK2P29597 1187 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 MAT2AP31153 395 aaKnown RBP13.73□□□□□ -0.21
HDAC6-215ENST00000465457 CTSOP43234 321 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-215ENST00000465457 ARCN1P48444 511 aaKnown RBP13.73□□□□□ -0.21
HDAC6-215ENST00000465457 LSSP48449 732 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 NUMBP49757 651 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 PLK1P53350 603 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 DAB2P98082 770 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 ACVR1Q04771 509 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 SRSF6Q13247 344 aaKnown RBP13.73□□□□□ -0.21
HDAC6-215ENST00000465457 OR52K2Q8NGK3 314 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 FIBINQ8TAL6 211 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 PTPRN2Q92932 1015 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 SKA1Q96BD8 255 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 MRGPRX3Q96LB0 322 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 KLF6Q99612 283 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-215ENST00000465457 GPR22Q99680 433 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 MCMBPQ9BTE3 642 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 PITPNM3Q9BZ71 974 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 ERVMER34-1Q9H9K5 563 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 POLR1BQ9H9Y6 1135 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 MLXIPLQ9NP71 852 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 IARS2Q9NSE4 1012 aaKnown RBP13.73□□□□□ -0.21
HDAC6-215ENST00000465457 PCMTD2Q9NV79 361 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 FGFR1OP2Q9NVK5 253 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 HACD3Q9P035 362 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 INTS6Q9UL03 887 aaKnown RBP13.73□□□□□ -0.21
HDAC6-215ENST00000465457 CORO1CQ9ULV4 474 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-215ENST00000465457 OR51B4Q9Y5P0 310 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 PSAT1Q9Y617 370 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 U3KQA8 63 aa13.73□□□□□ -0.21
HDAC6-215ENST00000465457 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 TPP1O14773 563 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 MUSKO15146 869 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 LATO43561 262 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 SNX3O60493 162 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 TMCC1O94876 653 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 VAPBO95292 243 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 ALDOAP04075 364 aaKnown RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 APOA4P06727 396 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 COL6A2P12110 1019 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 FOXN2P32314 431 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 CHRNA4P43681 627 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 SERPINB4P48594 390 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 CSNK1DP48730 415 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 CCR5P51681 352 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 HNRNPH2P55795 449 aaKnown RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 RPL26P61254 145 aaKnown RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 ARF5P84085 180 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 E2F5Q15329 346 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 CYTH1Q15438 398 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 LINC00303Q3SY05 128 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 POM121L1PQ3SYA9 428 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 CCDC153Q494R4 210 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 C9orf64Q5T6V5 341 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 ATG16L1Q676U5 607 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 NEPROQ6NW34 567 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 SPATA21Q7Z572 469 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 ZC3HC1Q86WB0 502 aaKnown RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 SLC25A41Q8N5S1 370 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 C2CD4AQ8NCU7 369 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 OR14C36Q8NHC7 312 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 BRSK1Q8TDC3 778 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 SREK1Q8WXA9 508 aaKnown RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 VPS39Q96JC1 886 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 LMLNQ96KR4 655 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 TSNARE1Q96NA8 513 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 FAM111AQ96PZ2 611 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 DEPDC7Q96QD5 511 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 TRIB3Q96RU7 358 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 OMDQ99983 421 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 C19orf43Q9BQ61 176 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 TDRD1Q9BXT4 1180 aaKnown RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 FAM117AQ9C073 453 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 RABEP2Q9H5N1 569 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 NOD2Q9HC29 1040 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 SLC17A7Q9P2U7 560 aa13.72□□□□□ -0.21
HDAC6-215ENST00000465457 RPL26L1Q9UNX3 145 aaKnown RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 HEMK1Q9Y5R4 338 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-215ENST00000465457 TTC34A8MYJ7 566 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 EFSO43281 561 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 EDF1O60869 148 aaKnown RBP13.71□□□□□ -0.21
HDAC6-215ENST00000465457 NEFHP12036 1026 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 SLC8A1P32418 973 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 DRD3P35462 400 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 CSKP41240 450 aa13.71□□□□□ -0.21
HDAC6-215ENST00000465457 CD151P48509 253 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms