RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 PATE1Q8WXA2 126 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 CCDC3Q9BQI4 270 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 SCNM1Q9BWG6 230 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 MRM3Q9HC36 420 aaKnown RBP11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 CATSPERZQ9NTU4 200 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 LRIT1Q9P2V4 623 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 FAM8A1Q9UBU6 413 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 TBC1D29Q9UFV1 150 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 SLC23A2Q9UGH3 650 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 CDC23Q9UJX2 597 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 SOX13Q9UN79 622 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 MAD1L1Q9Y6D9 718 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 RNF215Q9Y6U7 377 aa11.85□□□□□ -0.51
RPUSD3-211ENST00000464783 TRBV5-4A0A0C4DH59 114 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 EFCAB8A8MWE9 144 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 ZW10O43264 779 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 NUDT21O43809 227 aaKnown RBP11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 OPA1O60313 960 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 KCNJ13O60928 360 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 F3P13726 295 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 JUPP14923 745 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 PAMP19021 973 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 PSMA3P25788 255 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 FOXN2P32314 431 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 PPARGP37231 505 aaPredicted RBP11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 NSG1P42857 185 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 B4GALNT1Q00973 533 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 ACVR1Q04771 509 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 HLTFQ14527 1009 aaKnown RBP eCLIP11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 ITIH4Q14624 930 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 DBN1Q16643 649 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 AARS2Q5JTZ9 985 aaKnown RBP11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 CES3Q6UWW8 571 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 CERS6Q6ZMG9 384 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 MAATS1Q7Z4T9 603 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 HOOK3Q86VS8 718 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 PIANPQ8IYJ0 282 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 ARL14Q8N4G2 192 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 Q8N9G6 341 aaPredicted RBP11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 SLC37A2Q8TED4 501 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 ZNF669Q96BR6 464 aaPredicted RBP11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 SNF8Q96H20 258 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 KIFC1Q9BW19 673 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 ZMYND15Q9H091 742 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 VPS37BQ9H9H4 285 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 PRDM8Q9NQV8 689 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 TREX1Q9NSU2 369 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 KLK13Q9UKR3 277 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 DNMT3AQ9Y6K1 912 aaPredicted RBP11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 ASXL3Q9C0F0 2248 aa11.84□□□□□ -0.51
RPUSD3-211ENST00000464783 SPEGQ15772 3267 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 MAGEB16A2A368 324 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 FAM149AA5PLN7 773 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 KLHL33A6NCF5 533 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 FAM187AA6NFU0 413 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 OR5K4A6NMS3 321 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 NDC80O14777 642 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 CD3EAPO15446 510 aaKnown RBP11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 VAPBO95292 243 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 EML2O95834 649 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 RPLP0P05388 317 aaKnown RBP11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 RPL10P27635 214 aaKnown RBP11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 HALP42357 657 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 CLCNKAP51800 687 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 DRG2P55039 364 aaKnown RBP11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 CLDN6P56747 220 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 MRPS25P82663 173 aaKnown RBP11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 INSM1Q01101 510 aaPredicted RBP11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 SPIDRQ14159 915 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 NFE2L1Q14494 772 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 MORF4L2Q15014 288 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 SMAD1Q15797 465 aaKnown RBP11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 WHAMMP3Q1A5X7 153 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 BCL7AQ4VC05 210 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 DNAJC21Q5F1R6 531 aaKnown RBP11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 ARMC3Q5W041 872 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 TMPRSS7Q7RTY8 843 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 C11orf96Q7Z7L8 435 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 SLC9B2Q86UD5 537 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 TMPRSS12Q86WS5 348 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 TRIM48Q8IWZ4 208 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 CLDN19Q8N6F1 224 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 KIF18AQ8NI77 898 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 WDR48Q8TAF3 677 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 MFSD3Q96ES6 412 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 CCDC97Q96F63 343 aaPredicted RBP11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 STAMBPL1Q96FJ0 436 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 CLCA2Q9UQC9 943 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 NEUROG3Q9Y4Z2 214 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 RPS6KL1Q9Y6S9 549 aa11.83□□□□□ -0.52
RPUSD3-211ENST00000464783 IGLV3-16A0A075B6K0 115 aa11.82□□□□□ -0.52
RPUSD3-211ENST00000464783 KIR2DS5A0A0G2JLQ3 304 aa11.82□□□□□ -0.52
RPUSD3-211ENST00000464783 A0A0G2JNG1 304 aa11.82□□□□□ -0.52
RPUSD3-211ENST00000464783 FAM237BA0A1B0GVD1 139 aa11.82□□□□□ -0.52
RPUSD3-211ENST00000464783 MGAT4DA6NG13 374 aa11.82□□□□□ -0.52
RPUSD3-211ENST00000464783 F8W8V4 182 aa11.82□□□□□ -0.52
RPUSD3-211ENST00000464783 KIR2DS3K7RE56 304 aa11.82□□□□□ -0.52
RPUSD3-211ENST00000464783 SMAPO00193 183 aa11.82□□□□□ -0.52
RPUSD3-211ENST00000464783 QSOX1O00391 747 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms