RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SLC37A2Q8TED4 501 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 SYBUQ9NX95 663 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 ZDHHC3Q9NYG2 299 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 BFARQ9NZS9 450 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 CRLS1Q9UJA2 301 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 DNMT3AQ9Y6K1 912 aaPredicted RBP17.41■□□□□ 0.38
VPS52-214ENST00000463486 SLC30A1Q9Y6M5 507 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 ZZEF1O43149 2961 aa17.41■□□□□ 0.38
VPS52-214ENST00000463486 USP24Q9UPU5 2620 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 TRBV23OR9-2A0A075B6M9 112 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 AP3B1O00203 1094 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 TP73O15350 636 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 MLNP12872 115 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 F3P13726 295 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 MSH3P20585 1137 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 ARNTP27540 789 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 NMBRP28336 390 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 CASQ1P31415 396 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 FASLGP48023 281 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 PDX1P52945 283 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 CCL7P80098 99 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 SEMA3AQ14563 771 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 BCL7AQ4VC05 210 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 ZRANB3Q5FWF4 1079 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 FNBP1LQ5T0N5 605 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 ABRAXAS1Q6UWZ7 409 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 WASH2PQ6VEQ5 465 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 SPRED1Q7Z699 444 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 TRAPPC5Q8IUR0 188 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 KLHL7Q8IXQ5 586 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 MPP5Q8N3R9 675 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 BEND7Q8N7W2 519 aaPredicted RBP17.4■□□□□ 0.38
VPS52-214ENST00000463486 ZNF514Q96K75 400 aaPredicted RBP17.4■□□□□ 0.38
VPS52-214ENST00000463486 LINC00615Q96LM1 132 aaPredicted RBP17.4■□□□□ 0.38
VPS52-214ENST00000463486 TTC25Q96NG3 672 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 COPS8Q99627 209 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 ZCCHC2Q9C0B9 1178 aaKnown RBP17.4■□□□□ 0.38
VPS52-214ENST00000463486 MRM3Q9HC36 420 aaKnown RBP17.4■□□□□ 0.38
VPS52-214ENST00000463486 WASH6PQ9NQA3 447 aa17.4■□□□□ 0.38
VPS52-214ENST00000463486 CCDC188H7C350 402 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 KCNJ13O60928 360 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 GOT2P00505 430 aaKnown RBP17.39■□□□□ 0.37
VPS52-214ENST00000463486 AKT1P31749 480 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 UBE2IP63279 158 aaKnown RBP17.39■□□□□ 0.37
VPS52-214ENST00000463486 GTF2H3Q13889 308 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 INSCQ1MX18 579 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 AGAP9Q5VTM2 703 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 DET1Q7L5Y6 550 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 AMZ2Q86W34 360 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 PPHLN1Q8NEY8 458 aaKnown RBP17.39■□□□□ 0.37
VPS52-214ENST00000463486 OR4L1Q8NH43 312 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 SERPINB12Q96P63 405 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 ZNF624Q9P2J8 865 aaPredicted RBP17.39■□□□□ 0.37
VPS52-214ENST00000463486 SOX13Q9UN79 622 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 CLCA2Q9UQC9 943 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 DNAJC16Q9Y2G8 782 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 WDR37Q9Y2I8 494 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 LAMA5O15230 3695 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 UNC13CQ8NB66 2214 aa17.39■□□□□ 0.37
VPS52-214ENST00000463486 ANKRD11Q6UB99 2663 aaPredicted RBP17.38■□□□□ 0.37
VPS52-214ENST00000463486 CELSR3Q9NYQ7 3312 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 SNX2O60749 519 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 ATP1B2P14415 290 aaPredicted RBP17.38■□□□□ 0.37
VPS52-214ENST00000463486 JUPP14923 745 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 PAFAH1B1P43034 410 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 ARCN1P48444 511 aaKnown RBP17.38■□□□□ 0.37
VPS52-214ENST00000463486 OR1D5P58170 312 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 PPP1R7Q15435 360 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 ARMC3Q5W041 872 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 METRNLQ641Q3 311 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 CES3Q6UWW8 571 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 TAS2R42Q7RTR8 314 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 TMPRSS9Q7Z410 1059 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 JAMLQ86YT9 394 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 CCNJLQ8IV13 435 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 PPIL6Q8IXY8 311 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 CLDN19Q8N6F1 224 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 SPATA4Q8NEY3 305 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 HEXDCQ8WVB3 486 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 MFSD3Q96ES6 412 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 SIGLEC10Q96LC7 697 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 TRIM56Q9BRZ2 755 aaKnown RBP17.38■□□□□ 0.37
VPS52-214ENST00000463486 ABCG4Q9H172 646 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 LRRN3Q9H3W5 708 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 SARS2Q9NP81 518 aaKnown RBP17.38■□□□□ 0.37
VPS52-214ENST00000463486 MARCH4Q9P2E8 410 aaPredicted RBP17.38■□□□□ 0.37
VPS52-214ENST00000463486 PRSS21Q9Y6M0 314 aa17.38■□□□□ 0.37
VPS52-214ENST00000463486 KIR2DS5A0A0G2JLQ3 304 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 A0A0G2JNG1 304 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 A0A1W2PNU3 283 aaPredicted RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 MGAT4DA6NG13 374 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 OR5K4A6NMS3 321 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 C1QTNF9BB2RNN3 333 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 GOLGA8MH3BSY2 632 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 KIR2DS3K7RE56 304 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 DNALI1O14645 258 aaPredicted RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 TTI1O43156 1089 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 TCEA3O75764 348 aa17.37■□□□□ 0.37
VPS52-214ENST00000463486 RPLP0P05388 317 aaKnown RBP17.37■□□□□ 0.37
VPS52-214ENST00000463486 C1QTNF9P0C862 333 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms