RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 GJC1P36383 396 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 DRG2P55039 364 aaKnown RBP10.95□□□□□ -0.66
PTPN7-204ENST00000462815 DMPKQ09013 629 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 DNASE1L3Q13609 305 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 IL10RAQ13651 578 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 HADHQ16836 314 aaKnown RBP10.95□□□□□ -0.66
PTPN7-204ENST00000462815 INSCQ1MX18 579 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 FILIP1LQ4L180 1135 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 ATP13A5Q4VNC0 1218 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 CACHD1Q5VU97 1274 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 CPZQ66K79 652 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 HIST2H2BCQ6DN03 193 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 CAPRIN2Q6IMN6 1127 aaKnown RBP10.95□□□□□ -0.66
PTPN7-204ENST00000462815 PWWP2BQ6NUJ5 590 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 ALKBH5Q6P6C2 394 aaKnown RBP10.95□□□□□ -0.66
PTPN7-204ENST00000462815 CERS6Q6ZMG9 384 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 ZNF517Q6ZMY9 492 aaPredicted RBP10.95□□□□□ -0.66
PTPN7-204ENST00000462815 FAM92BQ6ZTR7 304 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 ASB18Q6ZVZ8 466 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 RBM12BQ8IXT5 1001 aaKnown RBP10.95□□□□□ -0.66
PTPN7-204ENST00000462815 STAMBPL1Q96FJ0 436 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 ELMO2Q96JJ3 720 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 PACSIN1Q9BY11 444 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 ADGRE3Q9BY15 652 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 ACTL8Q9H568 366 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 KCND3Q9UK17 655 aa10.95□□□□□ -0.66
PTPN7-204ENST00000462815 TNRC6AQ8NDV7 1962 aaKnown RBP10.94□□□□□ -0.66
PTPN7-204ENST00000462815 MYO9AB2RTY4 2548 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 RP1L1Q8IWN7 2480 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-204ENST00000462815 SMTNL1A8MU46 457 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 PDZK1P1A8MUH7 402 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 GPR39O43194 453 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 MT-CYBP00156 380 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-204ENST00000462815 GYPCP04921 128 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 AMD1P17707 334 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 FECHP22830 423 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 NOP2P46087 812 aaKnown RBP10.94□□□□□ -0.66
PTPN7-204ENST00000462815 RPS18P62269 152 aaKnown RBP10.94□□□□□ -0.66
PTPN7-204ENST00000462815 ZBED6P86452 979 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 CDK18Q07002 472 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 KCNAB1Q14722 419 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 UGT8Q16880 541 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 ASTE1Q2TB18 679 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-204ENST00000462815 PAPD7Q5XG87 772 aaKnown RBP10.94□□□□□ -0.66
PTPN7-204ENST00000462815 FAM83HQ6ZRV2 1179 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-204ENST00000462815 PPP1R3BQ86XI6 285 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 VSIG1Q86XK7 387 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 RASGRP3Q8IV61 690 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 TTC30BQ8N4P2 665 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 CCNYQ8ND76 341 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 SPATA22Q8NHS9 363 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 DTX3LQ8TDB6 740 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 ADAMTS17Q8TE56 1095 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 FCRL4Q96PJ5 515 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 TWSG1Q9GZX9 223 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 NAT10Q9H0A0 1025 aaKnown RBP10.94□□□□□ -0.66
PTPN7-204ENST00000462815 SLC25A51Q9H1U9 297 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 HAUS2Q9NVX0 235 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 UVRAGQ9P2Y5 699 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 LNPEPQ9UIQ6 1025 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 PADI1Q9ULC6 663 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 CAPN11Q9UMQ6 739 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 PCDHB3Q9Y5E6 796 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 SHANK1Q9Y566 2161 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 CSMD1Q96PZ7 3565 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 NOTCH2Q04721 2471 aa10.94□□□□□ -0.66
PTPN7-204ENST00000462815 CACNA1DQ01668 2161 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 KATNA1O75449 491 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 RASSF9O75901 435 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 CDK14O94921 469 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 EBLN1P0CF75 366 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 GNLYP22749 145 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 HNRNPH3P31942 346 aaKnown RBP10.93□□□□□ -0.66
PTPN7-204ENST00000462815 CD68P34810 354 aaPredicted RBP10.93□□□□□ -0.66
PTPN7-204ENST00000462815 HMGCLP35914 325 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 SSR1P43307 286 aaKnown RBP10.93□□□□□ -0.66
PTPN7-204ENST00000462815 CTSCP53634 463 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 TMEM115Q12893 351 aaPredicted RBP10.93□□□□□ -0.66
PTPN7-204ENST00000462815 TUBB3Q13509 450 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 NOMO1Q15155 1222 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 RPE65Q16518 533 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 IRGCQ6NXR0 463 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 FAM199XQ6PEV8 388 aaPredicted RBP10.93□□□□□ -0.66
PTPN7-204ENST00000462815 KDELC1Q6UW63 502 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 NPNTQ6UXI9 565 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 NT5DC3Q86UY8 548 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 MAP7D3Q8IWC1 876 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 TRIM48Q8IWZ4 208 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 TEX19Q8NA77 164 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 SLC38A9Q8NBW4 561 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 ZDHHC12Q96GR4 267 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 LRRC4CQ9HCJ2 640 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 IL26Q9NPH9 171 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 RAD18Q9NS91 495 aa10.93□□□□□ -0.66
PTPN7-204ENST00000462815 LOC285095A0A1B0GVY8 99 aa10.92□□□□□ -0.66
PTPN7-204ENST00000462815 PIPSLA2A3N6 862 aa10.92□□□□□ -0.66
PTPN7-204ENST00000462815 CEACAM4O75871 244 aa10.92□□□□□ -0.66
PTPN7-204ENST00000462815 NDST3O95803 873 aa10.92□□□□□ -0.66
PTPN7-204ENST00000462815 SLC4A1P02730 911 aa10.92□□□□□ -0.66
PTPN7-204ENST00000462815 MT-ND3P03897 115 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms