RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 SCYL2Q6P3W7 929 aa11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 BBS12Q6ZW61 710 aa11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 LYSMD3Q7Z3D4 306 aa11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 GALNT13Q8IUC8 556 aa11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 RASGRP3Q8IV61 690 aa11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 OLFM3Q96PB7 478 aa11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SLC29A3Q9BZD2 475 aa11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 DHX35Q9H5Z1 703 aaKnown RBP11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 STN1Q9H668 368 aaKnown RBP11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 TRMT1Q9NXH9 659 aaKnown RBP11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 KCTD5Q9NXV2 234 aa11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 PCDHGC4Q9Y5F7 938 aa11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 PCDHGA9Q9Y5G4 932 aaKnown RBP11.13□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ARHGAP42A6NI28 874 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ARGFXA6NJG6 315 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 HTRA2O43464 458 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ZNF500O60304 480 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ZNF189O75820 626 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 TIAF1O95411 115 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 FTCDO95954 541 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 C9P02748 559 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 CD48P09326 243 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 PRF1P14222 555 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ZFXP17010 805 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 GARSP41250 739 aaKnown RBP11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 NR2C2P49116 596 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 CCL11P51671 97 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 NAP1L1P55209 391 aaKnown RBP11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 CDH6P55285 790 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 TPI1P60174 286 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 NSUN2Q08J23 767 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 NR6A1Q15406 480 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 RPS6KA1Q15418 735 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ATP13A4Q4VNC1 1196 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ANKRD20A8PQ5CZ79 823 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 IYDQ6PHW0 289 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ADAMTSL4Q6UY14 1074 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SPOCD1Q6ZMY3 1216 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 TECPR1Q7Z6L1 1165 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 PLXDC1Q8IUK5 500 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SLC35F6Q8N357 371 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 PQLC3Q8N755 202 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 PLD5Q8N7P1 536 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 KCTD6Q8NC69 237 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SCAMP4Q969E2 229 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SH3KBP1Q96B97 665 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 C9orf72Q96LT7 481 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 WDR24Q96S15 920 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 AGAP2Q99490 1192 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SP110Q9HB58 689 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 LHX9Q9NQ69 397 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 GPATCH2LQ9NWQ4 482 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 OGFRQ9NZT2 677 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SNX12Q9UMY4 172 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 KCNK6Q9Y257 313 aa11.12□□□□□ -0.63
PRAMEF35P-201ENST00000458709 LRRD1A4D1F6 860 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 LILRA5A6NI73 299 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 PSMD11O00231 422 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 DFFAO00273 331 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 EEF2KO00418 725 aaKnown RBP11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SNX2O60749 519 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SPAG6O75602 509 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 RECKO95980 971 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 CCNYL3P0C7X3 344 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 PYGMP11217 842 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 CYP2A6P11509 494 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 TCP1P17987 556 aaKnown RBP11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ERCC2P18074 760 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 GRNP28799 593 aaKnown RBP11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SERPINB6P35237 376 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 LEPRP48357 1165 aaKnown RBP11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 DPTQ07507 201 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 TRAF2Q12933 501 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 IL10RAQ13651 578 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 TFDP2Q14188 446 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ZNF569Q5MCW4 686 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SLC6A19Q695T7 634 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 NCBP2-AS2Q69YL0 99 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 MFSD7Q6UXD7 560 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 CHST15Q7LFX5 561 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SLC9B2Q86UD5 537 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ARHGAP12Q8IWW6 846 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 NPWQ8N729 165 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ACTRT1Q8TDG2 376 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 HSPH1Q92598 858 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 AP2M1Q96CW1 435 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 C19orf60Q96EN9 201 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 PBKQ96KB5 322 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 C5orf34Q96MH7 638 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 TGM7Q96PF1 710 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 TSGA13Q96PP4 275 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SMIM14Q96QK8 99 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 FRMD8P1Q9BZ68 369 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 BRD8Q9H0E9 1235 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ING2Q9H160 280 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ABCG8Q9H221 673 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 AKIRIN1Q9H9L7 192 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 SLAMF7Q9NQ25 335 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 ACSS2Q9NR19 701 aa11.11□□□□□ -0.63
PRAMEF35P-201ENST00000458709 RNF14Q9UBS8 474 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms