RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ZNF711Q9Y462 761 aa10.24□□□□□ -0.77
HDLBP-227ENST00000458564 PCDHGA9Q9Y5G4 932 aaKnown RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 PRRC2CQ9Y520 2896 aaKnown RBP10.24□□□□□ -0.77
HDLBP-227ENST00000458564 DOPEY1Q5JWR5 2465 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 A0A087X0T9 212 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 IGHV5-51A0A0C4DH38 117 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 SMTNL1A8MU46 457 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 KCNJ13O60928 360 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 VPS4BO75351 444 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 DNAJB5O75953 348 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 SORBS2O94875 1100 aaKnown RBP10.23□□□□□ -0.77
HDLBP-227ENST00000458564 CDK14O94921 469 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 SERPING1P05155 500 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 FAM228BP0C875 321 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 BPIP17213 487 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 VCLP18206 1134 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 FECHP22830 423 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 RPL10P27635 214 aaKnown RBP10.23□□□□□ -0.77
HDLBP-227ENST00000458564 GJC1P36383 396 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 SSR1P43307 286 aaKnown RBP10.23□□□□□ -0.77
HDLBP-227ENST00000458564 UQCRFS1P47985 274 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 DMPKQ09013 629 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 NR1I3Q14994 352 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 PWWP2BQ6NUJ5 590 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 IRGCQ6NXR0 463 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 ALKBH5Q6P6C2 394 aaKnown RBP10.23□□□□□ -0.77
HDLBP-227ENST00000458564 KLHL35Q6PF15 583 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 ZNF517Q6ZMY9 492 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-227ENST00000458564 FAM92BQ6ZTR7 304 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 SYVN1Q86TM6 617 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 KMT5CQ86Y97 462 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 CPNE8Q86YQ8 564 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 PLD5Q8N7P1 536 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 DTX3LQ8TDB6 740 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 LRRN4Q8WUT4 740 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 CXorf40BQ96DE9 158 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 ELMO2Q96JJ3 720 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 GBP4Q96PP9 640 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 RNF157Q96PX1 679 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 CD180Q99467 661 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 TRIM55Q9BYV6 548 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 UVRAGQ9P2Y5 699 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 RARRES3Q9UL19 164 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 TMPRSS11EQ9UL52 423 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 NENFQ9UMX5 172 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 VPS4AQ9UN37 437 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 WDR37Q9Y2I8 494 aa10.23□□□□□ -0.77
HDLBP-227ENST00000458564 TLCD2A6NGC4 264 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 MTX2O75431 263 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 NDST3O95803 873 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 MBD3O95983 291 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 PIRTP0C851 137 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 FOLR1P15328 257 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 PTPN4P29074 926 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 HMGCLP35914 325 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 PBX1P40424 430 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 HALP42357 657 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 PGDP52209 483 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 DRG2P55039 364 aaKnown RBP10.22□□□□□ -0.77
HDLBP-227ENST00000458564 TAS2R40P59535 323 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 PPP1CAP62136 330 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 ACY1Q03154 408 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 CDK18Q07002 472 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 ATP13A5Q4VNC0 1218 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 FHL5Q5TD97 284 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 SLC9A4Q6AI14 798 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 NT5DC3Q86UY8 548 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 TRAPPC5Q8IUR0 188 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 CARFQ8N187 725 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 EFCAB3Q8N7B9 438 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 SIDT2Q8NBJ9 832 aaKnown RBP10.22□□□□□ -0.77
HDLBP-227ENST00000458564 CPT1CQ8TCG5 803 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 BRSK1Q8TDC3 778 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 IQCDQ96DY2 449 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 RNF31Q96EP0 1072 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 ZNF514Q96K75 400 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-227ENST00000458564 OLFM3Q96PB7 478 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 GPR63Q9BZJ6 419 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 SLC25A51Q9H1U9 297 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 CUEDC1Q9NWM3 386 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-227ENST00000458564 PLEKHB1Q9UF11 243 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-227ENST00000458564 PCDHGB7Q9Y5F8 929 aa10.22□□□□□ -0.77
HDLBP-227ENST00000458564 TTLL8A6PVC2 850 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 CPNE3O75131 537 aaKnown RBP10.21□□□□□ -0.77
HDLBP-227ENST00000458564 CEACAM4O75871 244 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 AGFG2O95081 481 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 SLC4A1P02730 911 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 LPOP22079 712 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-227ENST00000458564 GNLYP22749 145 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 KDELR1P24390 212 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 TUBB4BP68371 445 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 ZBED6P86452 979 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 TMEM115Q12893 351 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-227ENST00000458564 IL10RAQ13651 578 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 TUBB2AQ13885 445 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 KCNAB1Q14722 419 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 PDK1Q15118 436 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 IZUMO3Q5VZ72 239 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 ZDHHC20Q5W0Z9 365 aa10.21□□□□□ -0.77
HDLBP-227ENST00000458564 CPZQ66K79 652 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms