RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TNKS2Q9H2K2 1166 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 ATP13A3Q9H7F0 1226 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 TMEM45AQ9NWC5 275 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 RAB26Q9ULW5 256 aa16.48■□□□□ 0.23
CCDC43-202ENST00000457422 C1orf232A0A0U1RR37 186 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 C9JVG2 144 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 FXYD1O00168 92 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 EFCAB14O75071 495 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 RNASEH2AO75792 299 aaKnown RBP16.47■□□□□ 0.23
CCDC43-202ENST00000457422 GJA1P17302 382 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 ITGALP20701 1170 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 ITGB8P26012 769 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 CD70P32970 193 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 FOLH1Q04609 750 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 GRM2Q14416 872 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 RPS6KA2Q15349 733 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 SPATS1Q496A3 300 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 VPS26BQ4G0F5 336 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 IL23RQ5VWK5 629 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 PTRHD1Q6GMV3 140 aaKnown RBP16.47■□□□□ 0.23
CCDC43-202ENST00000457422 CBARPQ8N350 705 aaPredicted RBP16.47■□□□□ 0.23
CCDC43-202ENST00000457422 CHCHD4Q8N4Q1 142 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 PAF1Q8N7H5 531 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 LYSMD1Q96S90 227 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 BOCQ9BWV1 1114 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 CIPCQ9C0C6 399 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 ASB8Q9H765 288 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 IL26Q9NPH9 171 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 AP4S1Q9Y587 144 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 CSF2RAP15509 400 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 PFKLP17858 780 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 PAX7P23759 505 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 ACRV1P26436 265 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 SLC7A1P30825 629 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 HNF1BP35680 557 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 DIO3P55073 304 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 ERVK-8P63133 956 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 RCAN2Q14206 197 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 FBXL19Q6PCT2 694 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 FRA10AC1Q70Z53 315 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 MARVELD2Q8N4S9 558 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 PDPRQ8NCN5 879 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 LKAAEAR1Q8TD35 194 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 SLC45A3Q96JT2 553 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 GCNAQ96QF7 691 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 UHRF1Q96T88 793 aaPredicted RBP16.47■□□□□ 0.23
CCDC43-202ENST00000457422 YME1L1Q96TA2 773 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 RIC8BQ9NVN3 520 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 GID8Q9NWU2 228 aa16.47■□□□□ 0.23
CCDC43-202ENST00000457422 PTPRSQ13332 1948 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 TRAV19A0A0A6YYK7 116 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 NME4O00746 187 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 OR4F21O95013 312 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 CLDN7O95471 211 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 LRG1P02750 347 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 ZCCHC18P0CG32 403 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 CTSAP10619 480 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 HSPA8P11142 646 aaKnown RBP16.46■□□□□ 0.23
CCDC43-202ENST00000457422 HSD17B1P14061 328 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 ITGB6P18564 788 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 PDCD4Q53EL6 469 aaKnown RBP16.46■□□□□ 0.23
CCDC43-202ENST00000457422 SCIMPQ6UWF3 145 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 FIBCD1Q8N539 461 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 OR2AP1Q8NGE2 309 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 ZUFSPQ96AP4 578 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 LMLNQ96KR4 655 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 Q9H521 79 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 INTS6Q9UL03 887 aaKnown RBP16.46■□□□□ 0.23
CCDC43-202ENST00000457422 PRSS21Q9Y6M0 314 aa16.46■□□□□ 0.23
CCDC43-202ENST00000457422 A0A1W2PP18 115 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 A0A1W2PRU2 124 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 AP1G1O43747 822 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 DNAJA2O60884 412 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 GLUD1P00367 558 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 BPIP17213 487 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 SERPINA4P29622 427 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 SPAM1P38567 509 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 ZFP36L2P47974 494 aaKnown RBP16.46■□□□□ 0.22
CCDC43-202ENST00000457422 HSPA13P48723 471 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 RGS4P49798 205 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 PTPN5P54829 565 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 ERVPABLB-1P60509 514 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 PDK3Q15120 406 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 C18orf21Q32NC0 220 aaPredicted RBP16.46■□□□□ 0.22
CCDC43-202ENST00000457422 MAP7D1Q3KQU3 841 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 GPR33Q49SQ1 333 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 PITRM1Q5JRX3 1037 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 LILRA6Q6PI73 481 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 ZSWIM9Q86XI8 627 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 DCBLD1Q8N8Z6 715 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 OR52B6Q8NGF0 335 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 OR2T11Q8NH01 316 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 PBXIP1Q96AQ6 731 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 VOPP1Q96AW1 172 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 LRCH3Q96II8 777 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 TRAPPC9Q96Q05 1148 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 SMG9Q9H0W8 520 aaKnown RBP16.46■□□□□ 0.22
CCDC43-202ENST00000457422 IL1RL2Q9HB29 575 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 ZIM2Q9NZV7 527 aa16.46■□□□□ 0.22
CCDC43-202ENST00000457422 GMPR2Q9P2T1 348 aaKnown RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms