RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SYNJ2BP-COX16A0A087WUM0 186 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 ZNF840PA6NDX5 716 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 FAM90A18PA6NE21 464 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 FAM90A16PA6NEW6 464 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 AQP7P3A6NL99 342 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 FAM90A9PA6NNJ1 464 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 FAM90A5PA8MXJ8 464 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 KCNU1A8MYU2 1149 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 ZNF487B1APH4 448 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 CCDC188H7C350 402 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 I6L893 689 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TAF4O00268 1085 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TJP3O95049 919 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GOSR1O95249 250 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 C1RP00736 705 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GASTP01350 101 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 IGLV1-40P01703 118 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 LRG1P02750 347 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 CD48P09326 243 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 SBK3P0C264 359 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 FAM90A15PP0C7V4 464 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 FAM90A14PP0C7W9 464 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GAAP10253 952 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 RARGP13631 454 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 KRT10P13645 584 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 KLRC2P26717 231 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 EPHA8P29322 1005 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GRK5P34947 590 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 CA8P35219 290 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 THBS2P35442 1172 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 PPARGP37231 505 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 ARL4AP40617 200 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 PTDSS1P48651 473 aaKnown RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 EPHB3P54753 998 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 CDH6P55285 790 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 WNT3AP56704 352 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 MRPS35P82673 323 aaKnown RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 CD83Q01151 205 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 PRKCQQ04759 706 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 C2orf54Q08AI8 447 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 AP1B1Q10567 949 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TWF1Q12792 350 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GPS1Q13098 491 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 NME3Q13232 169 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GPM6BQ13491 265 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TDGQ13569 410 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 DPYSL3Q14195 570 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TBCCQ15814 346 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 DPYSL2Q16555 572 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 CYP1B1Q16678 543 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 KYNUQ16719 465 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 CA9Q16790 459 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GLE1Q53GS7 698 aaKnown RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TFDP3Q5H9I0 405 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TEX35Q5T0J7 233 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 LIPMQ5VYY2 423 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 PLPP4Q5VZY2 271 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TRIM68Q6AZZ1 485 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 MSANTD2Q6P1R3 559 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 SHQ1Q6PI26 577 aaKnown RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 INO80CQ6PI98 192 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TAC4Q86UU9 113 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 FAM131BQ86XD5 332 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 MAP7D3Q8IWC1 876 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 KIAA2013Q8IYS2 634 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 CCDC185Q8N715 623 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 PIK3C3Q8NEB9 887 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GDAP1Q8TB36 358 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 DQX1Q8TE96 717 aaKnown RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 RNF139Q8WU17 664 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 SLC22A17Q8WUG5 538 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 HMGB4Q8WW32 186 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 ZFPM2Q8WW38 1151 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 MAIP1Q8WWC4 291 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 OVCA2Q8WZ82 227 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 CASP10Q92851 521 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 NTAN1Q96AB6 310 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 MISP3Q96FF7 219 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GBP5Q96PP8 586 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 RNF157Q96PX1 679 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 KRT12Q99456 494 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 LRRC1Q9BTT6 524 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 SNRNP25Q9BV90 132 aaKnown RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 SLC25A32Q9H2D1 315 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 SMOC2Q9H3U7 446 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 DHX35Q9H5Z1 703 aaKnown RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TRPV4Q9HBA0 871 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 PCDH18Q9HCL0 1135 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 PDE7BQ9NP56 450 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 SLC35C2Q9NQQ7 365 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 ENTPD7Q9NQZ7 604 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 TLR8Q9NR97 1041 aaKnown RBP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 HOMER3Q9NSC5 361 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 GPATCH2LQ9NWQ4 482 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 MTMR10Q9NXD2 777 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 LMCD1Q9NZU5 365 aa5.22□□□□□ -1.57
HMGB1P4-201ENST00000455362 COX16Q9P0S2 106 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms