RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SKA1Q96BD8 255 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 CCDC97Q96F63 343 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-206ENST00000454852 KLHDC7BQ96G42 594 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 PANX3Q96QZ0 392 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 SH3GL2Q99962 352 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 ERVMER34-1Q9H9K5 563 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 CA5BQ9Y2D0 317 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 CRYL1Q9Y2S2 319 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 VWA7Q9Y334 891 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 PRSS21Q9Y6M0 314 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 SPAG17Q6Q759 2223 aa11.1□□□□□ -0.63
TRAF4-206ENST00000454852 LRP4O75096 1905 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 UBA6A0AVT1 1052 aaPredicted RBP11.09□□□□□ -0.63
TRAF4-206ENST00000454852 TLR4O00206 839 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 EIF3FO00303 357 aaPredicted RBP11.09□□□□□ -0.63
TRAF4-206ENST00000454852 KPNA5O15131 536 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 MTX2O75431 263 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 FTH1P02794 183 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 FUCA1P04066 466 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 GNSP15586 552 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 ITPKAP23677 461 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 MAOBP27338 520 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 FMO4P31512 558 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 SLC26A3P40879 764 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 DHPSP49366 369 aaPredicted RBP11.09□□□□□ -0.63
TRAF4-206ENST00000454852 CLCNKAP51800 687 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 THOP1P52888 689 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 NXPH1P58417 271 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 DMPKQ09013 629 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 PDE1CQ14123 709 aaPredicted RBP11.09□□□□□ -0.63
TRAF4-206ENST00000454852 FZD2Q14332 565 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 GBX1Q14549 363 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 CEP85LQ5SZL2 805 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 RBM20Q5T481 1227 aaKnown RBP11.09□□□□□ -0.63
TRAF4-206ENST00000454852 HECTD2Q5U5R9 776 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 KDM7AQ6ZMT4 941 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 CEP68Q76N32 757 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 TRIM74Q86UV6 250 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 PARGQ86W56 976 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 DEFB119Q8N690 84 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 ACMSDQ8TDX5 336 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 SGF29Q96ES7 293 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 TSPAN17Q96FV3 270 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 MYOCQ99972 504 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 TIMM29Q9BSF4 260 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 TSSK1BQ9BXA7 367 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 IRF2BPLQ9H1B7 796 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 OR2AG1Q9H205 316 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 CCDC68Q9H2F9 335 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 FGF22Q9HCT0 170 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 AASDHPPTQ9NRN7 309 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 TRNAU1APQ9NX07 287 aaKnown RBP11.09□□□□□ -0.63
TRAF4-206ENST00000454852 TAS2R13Q9NYV9 303 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 MTO1Q9Y2Z2 717 aaKnown RBP11.09□□□□□ -0.63
TRAF4-206ENST00000454852 PCDHGA5Q9Y5G8 931 aa11.09□□□□□ -0.63
TRAF4-206ENST00000454852 PRSS38A1L453 326 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 KMOO15229 486 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 GRID2O43424 1007 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 VPS26AO75436 327 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 EPN2O95208 641 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 ASMTLO95671 621 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 ALDOAP04075 364 aaKnown RBP11.08□□□□□ -0.64
TRAF4-206ENST00000454852 F7P08709 466 aaPredicted RBP11.08□□□□□ -0.64
TRAF4-206ENST00000454852 CRABP2P29373 138 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 ATP5DP30049 168 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 SLCO1A2P46721 670 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 SERPINB8P50452 374 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 CLCN7P51798 805 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 TAS2R39P59534 338 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 PLOD1Q02809 727 aaPredicted RBP11.08□□□□□ -0.64
TRAF4-206ENST00000454852 TCF15Q12870 199 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 LRP8Q14114 963 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 TEAD4Q15561 434 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 KRT71Q3SY84 523 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 PYCR3Q53H96 274 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 ZNF648Q5T619 568 aaPredicted RBP11.08□□□□□ -0.64
TRAF4-206ENST00000454852 PTRHD1Q6GMV3 140 aaKnown RBP11.08□□□□□ -0.64
TRAF4-206ENST00000454852 UGT3A1Q6NUS8 523 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 TMEM220Q6QAJ8 160 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 SH2D5Q6ZV89 423 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 LRRTM4Q86VH4 590 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 RGL4Q8IZJ4 473 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 CYP4X1Q8N118 509 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 DCLK2Q8N568 766 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 ACVR1CQ8NER5 493 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 CEP76Q8TAP6 659 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 OR1E3Q8WZA6 343 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 OLFM1Q99784 485 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 CCM2Q9BSQ5 444 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 ACBD3Q9H3P7 528 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 TMBIM4Q9HC24 238 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 SPATS2LQ9NUQ6 558 aaKnown RBP11.08□□□□□ -0.64
TRAF4-206ENST00000454852 TMEM74BQ9NUR3 256 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 SENP1Q9P0U3 644 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 GULP1Q9UBP9 304 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 CTNNAL1Q9UBT7 734 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 TMEM98Q9Y2Y6 226 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 DHRS7Q9Y394 339 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 ACTL7BQ9Y614 415 aa11.08□□□□□ -0.64
TRAF4-206ENST00000454852 PIKFYVEQ9Y2I7 2098 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms