RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 GPR89AB7ZAQ6 455 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 TSPAN6O43657 245 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 IGSF6O95976 241 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 RPS17P08708 135 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 KRT16P08779 473 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 GPR89BP0CG08 455 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 POLR2EP19388 210 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 HNRNPH1P31943 449 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 HPDP32754 393 aaPredicted RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 ETV3P41162 512 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 LIG3P49916 1009 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 CACNG1Q06432 222 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 HYAL2Q12891 473 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 LRRC14Q15048 493 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 IRF4Q15306 451 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 LVRNQ6Q4G3 990 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 IQCHQ86VS3 1027 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 KCNMB4Q86W47 210 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 TICAM1Q8IUC6 712 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 CAMKK1Q8N5S9 505 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 FAM136AQ96C01 138 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 NECAB3Q96P71 396 aaPredicted RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 ZNF717Q9BY31 904 aaPredicted RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 TRIM4Q9C037 500 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 CLPBQ9H078 707 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 RASSF4Q9H2L5 321 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 GSTO2Q9H4Y5 243 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 HACD3Q9P035 362 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 PTBP2Q9UKA9 531 aaKnown RBP4.89□□□□□ -1.63
RIF1-207ENST00000454583 COMMD10Q9Y6G5 202 aa4.89□□□□□ -1.63
RIF1-207ENST00000454583 AKAP13Q12802 2813 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PROB1E7EW31 1015 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 MAN2B1O00754 1011 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 TM4SF5O14894 197 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PEX11AO75192 247 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ACSL1P33121 698 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 SERPINB4P48594 390 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 INHBCP55103 352 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 KCNJ2P63252 427 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 KIAA0040Q15053 153 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 GPR33Q49SQ1 333 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PYCR3Q53H96 274 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 SYCP2LQ5T4T6 812 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 IRAK1BP1Q5VVH5 260 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CES3Q6UWW8 571 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ZNF771Q7L3S4 317 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 SRRM1Q8IYB3 904 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 ZNF513Q8N8E2 541 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.88□□□□□ -1.634e-14■■■■■ 31
RIF1-207ENST00000454583 MICAL1Q8TDZ2 1067 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 IFT43Q96FT9 208 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 DUS3LQ96G46 650 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 FAM161BQ96MY7 647 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 FOXQ1Q9C009 403 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 DERL2Q9GZP9 239 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ZNF395Q9H8N7 513 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 UCK1Q9HA47 277 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ZDHHC4Q9NPG8 344 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PPANQ9NQ55 473 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 OXSMQ9NWU1 459 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 KCNK4Q9NYG8 393 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PILRBQ9UKJ0 227 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 FBXO4Q9UKT5 387 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 A0A0C4DFX4 3053 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 TDRD6O60522 2096 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 GOLGA8MH3BSY2 632 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CCL22O00626 93 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 E2F3O00716 465 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 NDUFAB1O14561 156 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 AP2A2O94973 939 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 GSTM1P09488 218 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 COL6A2P12110 1019 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 IBSPP21815 317 aaPredicted RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 BCKDHBP21953 392 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 SERPINB9P50453 376 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PDX1P52945 283 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CTSCP53634 463 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 GSTM4Q03013 218 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ILF2Q12905 390 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 FZD2Q14332 565 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 XKR7Q5GH72 579 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 CDKL4Q5MAI5 379 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ZDHHC20Q5W0Z9 365 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 METTL2BQ6P1Q9 378 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 VN1R5Q7Z5H4 357 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 LRRC6Q86X45 466 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 DCLK2Q8N568 766 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ZNF366Q8N895 744 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 TXNDC5Q8NBS9 432 aaKnown RBP4.88□□□□□ -1.63
RIF1-207ENST00000454583 PRSS33Q8NF86 280 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 OR4K2Q8NGD2 314 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 OR4K1Q8NGD4 311 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 OR6K2Q8NGY2 324 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PYROXD1Q8WU10 500 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 PPP2R3CQ969Q6 453 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ZDHHC5Q9C0B5 715 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 MUC3BQ9H195 1237 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 ERVMER34-1Q9H9K5 563 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 SGK2Q9HBY8 427 aa4.88□□□□□ -1.63
RIF1-207ENST00000454583 KLC4Q9NSK0 619 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms