RNA–Protein interactions for RNA: ENST00000453734.1

USP34-205, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 1 (best)

Gene USP34, Length 2,708 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-205ENST00000453734 GIMAP4Q9NUV9 329 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 NFKBIL1Q9UBC1 381 aaPredicted RBP2.83□□□□□ -1.96
USP34-205ENST00000453734 SEC63Q9UGP8 760 aaKnown RBP2.83□□□□□ -1.96
USP34-205ENST00000453734 COL16A1Q07092 1604 aaPredicted RBP2.83□□□□□ -1.96
USP34-205ENST00000453734 URADA6NGE7 173 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 A6NL46 340 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 PLK4O00444 970 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 ANKRD28O15084 1053 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 CLDN14O95500 239 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 HIST1H2ABP04908 130 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 HIST1H2ADP20671 130 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 PNLIPRP2P54317 469 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 SREBF2Q12772 1141 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 HLFQ16534 295 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 KRT24Q2M2I5 525 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 ATP13A5Q4VNC0 1218 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 TDRD12Q587J7 1177 aaKnown RBP2.83□□□□□ -1.96
USP34-205ENST00000453734 RARS2Q5T160 578 aaKnown RBP2.83□□□□□ -1.96
USP34-205ENST00000453734 TEX38Q6PEX7 206 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 HIST3H2AQ7L7L0 130 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 CEP97Q8IW35 865 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 TMTC2Q8N394 836 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 RBM15BQ8NDT2 890 aaKnown RBP2.83□□□□□ -1.96
USP34-205ENST00000453734 SPATA22Q8NHS9 363 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 BBS10Q8TAM1 723 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 PRPF31Q8WWY3 499 aaKnown RBP2.83□□□□□ -1.96
USP34-205ENST00000453734 TANKQ92844 425 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 VOPP1Q96AW1 172 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 SEMA3CQ99985 751 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 TEX12Q9BXU0 123 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 TXLNGYQ9BZA5 131 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 ANKRD2Q9GZV1 360 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 GOLPH3LQ9H4A5 285 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 NKIRAS2Q9NYR9 191 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 WDR35Q9P2L0 1181 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 IL36RNQ9UBH0 155 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 ACSL5Q9ULC5 683 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 PCSK5Q92824 1860 aa2.83□□□□□ -1.96
USP34-205ENST00000453734 DHX29Q7Z478 1369 aaKnown RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 ARHGAP5Q13017 1502 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 ARHGAP35Q9NRY4 1499 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 SRRM3A6NNA2 597 aaPredicted RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 SPINT2O43291 252 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 MYOD1P15172 320 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 ITGA2P17301 1181 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 HRH2P25021 359 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 HOXD3P31249 432 aaPredicted RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 HOXA13P31271 388 aaPredicted RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 HOXC9P31274 260 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 MMP14P50281 582 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 CLCNKAP51800 687 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 CLDN20P56880 219 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 CALD1Q05682 793 aaKnown RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 GRIK2Q13002 908 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 GRAPQ13588 217 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 NTRK2Q16620 822 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 MEP1AQ16819 746 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 FAM98BQ52LJ0 330 aaKnown RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 ALS2CLQ60I27 953 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 FRG2Q64ET8 278 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 ADHFE1Q8IWW8 467 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 CCDC191Q8NCU4 936 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 TBC1D16Q8TBP0 767 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 UTP15Q8TED0 518 aaKnown RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 SLC20A1Q8WUM9 679 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 ZNF622Q969S3 477 aaKnown RBP eCLIP2.82□□□□□ -1.969e-7■■■■□ 20.1
USP34-205ENST00000453734 MTERF1Q99551 399 aaKnown RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 TAB2Q9NYJ8 693 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 HACL1Q9UJ83 578 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 AGO1Q9UL18 857 aaKnown RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 ZNF711Q9Y462 761 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 CEP152O94986 1710 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 XRN1Q8IZH2 1706 aaKnown RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 LOC102723996A0A087X1L8 192 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 IGLV5-52A0A0A0MRZ9 124 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 LNP1A1A4G5 178 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 LRRC72A6NJI9 287 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 J3QR06 171 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 MAP2K7O14733 419 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 ZNF500O60304 480 aaPredicted RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 ZBTB11O95625 1053 aaPredicted RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 PRSS2P07478 247 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 NR2F1P10589 423 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 CDK4P11802 303 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 ACTN1P12814 892 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 ZNF12P17014 697 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 LMAN1P49257 510 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 ZBED6P86452 979 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 PDE1BQ01064 536 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 AIMP1Q12904 312 aaKnown RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 LETM2Q2VYF4 491 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 PPP6R3Q5H9R7 873 aaPredicted RBP2.82□□□□□ -1.96
USP34-205ENST00000453734 C18orf63Q68DL7 685 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 GPR180Q86V85 440 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 DNAAF5Q86Y56 855 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 SCARB1Q8WTV0 552 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 FIZ1Q96SL8 496 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 SEMA6AQ9H2E6 1030 aa2.82□□□□□ -1.96
USP34-205ENST00000453734 SLC35C2Q9NQQ7 365 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms