RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 SLC25A51Q9H1U9 297 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 ZFYVE1Q9HBF4 777 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 RAB6BQ9NRW1 208 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 ZDHHC18Q9NUE0 388 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 VPS18Q9P253 973 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 MTRF1LQ9UGC7 380 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 NFU1Q9UMS0 254 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 PCDHGA7Q9Y5G6 932 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 ST14Q9Y5Y6 855 aa17.82■□□□□ 0.44
SQSTM1-204ENST00000453046 ATXN7O15265 892 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 SLC4A1P02730 911 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 MYBL2P10244 700 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 GPR3P46089 330 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 ITGA8P53708 1063 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 BASP1P80723 227 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 SEMA5AQ13591 1074 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 KCNJ11Q14654 390 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 KCTD19Q17RG1 926 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 HENMT1Q5T8I9 393 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 USP53Q70EK8 1073 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 CHST15Q7LFX5 561 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 LYSMD3Q7Z3D4 306 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 ZNF438Q7Z4V0 828 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 GSPT2Q8IYD1 628 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 AENQ8WTP8 325 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 CPT1BQ92523 772 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 ANKRD7Q92527 254 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 IMP4Q96G21 291 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 ZMYND15Q9H091 742 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 SEMA6CQ9H3T2 930 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 EIF2B3Q9NR50 452 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 RSPH14Q9UHP6 348 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 PRKAB1Q9Y478 270 aa17.81■□□□□ 0.44
SQSTM1-204ENST00000453046 TRBV23OR9-2A0A075B6M9 112 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 PPM1DO15297 605 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 TP73O15350 636 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 PIRTP0C851 137 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 ITIH1P19827 911 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 TPSB2P20231 275 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 MAPK10P53779 464 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 PLTPP55058 493 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 CDK18Q07002 472 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 VAC14Q08AM6 782 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 NR1D2Q14995 579 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 TPSAB1Q15661 275 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 CLPPQ16740 277 aaPredicted RBP17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 PARP6Q2NL67 630 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 FBXO38Q6PIJ6 1188 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 CCDC81Q6ZN84 652 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 CEP128Q6ZU80 1094 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 PID1Q7Z2X4 250 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 TMPRSS9Q7Z410 1059 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 SLITRK4Q8IW52 837 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 FBXO25Q8TCJ0 367 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 SPATA16Q9BXB7 569 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 GPR63Q9BZJ6 419 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 PHACTR1Q9C0D0 580 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 TSPYL1Q9H0U9 437 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 KCNK4Q9NYG8 393 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 ANAPC5Q9UJX4 755 aa17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 OAS3Q9Y6K5 1087 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-204ENST00000453046 ERI2A8K979 691 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 FADS2P1A8MWK0 482 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 TK2O00142 265 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 DNAJC6O75061 913 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 METTL18O95568 372 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 PSMB4P28070 264 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 CD68P34810 354 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 TNNT3P45378 269 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 CDK16Q00536 496 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 CLN3Q13286 438 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 TAF1BQ53T94 588 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 ALS2CLQ60I27 953 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 PPP1R21Q6ZMI0 780 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 KLHDC8BQ8IXV7 354 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 NAT8LQ8N9F0 302 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 LSM14AQ8ND56 463 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 SPATA22Q8NHS9 363 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 CAVIN3Q969G5 261 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 AHCYL2Q96HN2 611 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 TRIB3Q96RU7 358 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 NUDT22Q9BRQ3 303 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 STN1Q9H668 368 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 RMI1Q9H9A7 625 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 ETNK1Q9HBU6 452 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 GLOD4Q9HC38 313 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 MAGEE1Q9HCI5 957 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 RAD18Q9NS91 495 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 UBP1Q9NZI7 540 aa17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 CNOT6Q9ULM6 557 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-204ENST00000453046 FASNP49327 2511 aaKnown RBP17.78■□□□□ 0.44
SQSTM1-204ENST00000453046 ERVH48-1M5A8F1 160 aa17.78■□□□□ 0.44
SQSTM1-204ENST00000453046 NVLO15381 856 aaKnown RBP17.78■□□□□ 0.44
SQSTM1-204ENST00000453046 PMPCBO75439 489 aa17.78■□□□□ 0.44
SQSTM1-204ENST00000453046 TMEM63AO94886 807 aa17.78■□□□□ 0.44
SQSTM1-204ENST00000453046 SLC25A14O95258 325 aaPredicted RBP17.78■□□□□ 0.44
SQSTM1-204ENST00000453046 MT-CYBP00156 380 aaPredicted RBP17.78■□□□□ 0.44
SQSTM1-204ENST00000453046 ACP5P13686 325 aa17.78■□□□□ 0.44
SQSTM1-204ENST00000453046 NFKB1P19838 968 aa17.78■□□□□ 0.44
SQSTM1-204ENST00000453046 CD1CP29017 333 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms