RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SPAM1P38567 509 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 MAPK8P45983 427 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 ILF2Q12905 390 aaKnown RBP11.64□□□□□ -0.55
VTA1-203ENST00000452973 ZNF423Q2M1K9 1284 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 PIGGQ5H8A4 983 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 KANK2Q63ZY3 851 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 IRF7Q92985 503 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 PBXIP1Q96AQ6 731 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 KLHL32Q96NJ5 620 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 RAD9AQ99638 391 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 CACNA2D2Q9NY47 1150 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 KIAA1671Q9BY89 1806 aa11.64□□□□□ -0.55
VTA1-203ENST00000452973 CARNS1A5YM72 827 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 GRM6O15303 877 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 FGF4P08620 206 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 ME2P23368 584 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 PSMA3P25788 255 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 SOX11P35716 441 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 HERC3Q15034 1050 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 TRIP10Q15642 601 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 ARHGAP15Q53QZ3 475 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 DHDDSQ86SQ9 333 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 SPATA24Q86W54 205 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 TRIM8Q9BZR9 551 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 GNPTGQ9UJJ9 305 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 PRPF19Q9UMS4 504 aaKnown RBP11.63□□□□□ -0.55
VTA1-203ENST00000452973 MOSPD3O75425 235 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 RPS17P08708 135 aaKnown RBP11.63□□□□□ -0.55
VTA1-203ENST00000452973 LHCGRP22888 699 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 ACRV1P26436 265 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 CASP2P42575 452 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 PIK3CGP48736 1102 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 HSPA7P48741 367 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 MAPRE2Q15555 327 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 ATP13A5Q4VNC0 1218 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 USP45Q70EL2 814 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 FUNDC1Q8IVP5 155 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 MYO1HQ8N1T3 1032 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 OR56A4Q8NGH8 313 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 SPPL3Q8TCT6 385 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 ZNF184Q99676 751 aaPredicted RBP11.63□□□□□ -0.55
VTA1-203ENST00000452973 SPHK2Q9NRA0 654 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 PCDHB1Q9Y5F3 818 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 PIKFYVEQ9Y2I7 2098 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 PTPRSQ13332 1948 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 CEP290O15078 2479 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 NRP2O60462 931 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 CHEK2O96017 543 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 S100BP04271 92 aaPredicted RBP11.63□□□□□ -0.55
VTA1-203ENST00000452973 LBPP18428 481 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 RECQLP46063 649 aaPredicted RBP11.63□□□□□ -0.55
VTA1-203ENST00000452973 PTSQ03393 145 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 PPIGQ13427 754 aaKnown RBP eCLIP11.63□□□□□ -0.55
VTA1-203ENST00000452973 CDKN3Q16667 212 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 CARD16Q5EG05 197 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 TMEM240Q5SV17 173 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 GRAMD4Q6IC98 578 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 MBOAT1Q6ZNC8 495 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 GPRIN3Q6ZVF9 776 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 JADE3Q92613 823 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 ARMC5Q96C12 935 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 SCRN2Q96FV2 425 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 BRD9Q9H8M2 597 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 CERS4Q9HA82 394 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 GMPR2Q9P2T1 348 aaKnown RBP11.63□□□□□ -0.55
VTA1-203ENST00000452973 PCDHGA7Q9Y5G6 932 aa11.63□□□□□ -0.55
VTA1-203ENST00000452973 E2F3O00716 465 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 FFAR2O15552 330 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 ARHGEF15O94989 841 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 ESRRBO95718 433 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 HSPA1AP0DMV8 641 aaKnown RBP11.62□□□□□ -0.55
VTA1-203ENST00000452973 HSPA1BP0DMV9 641 aaKnown RBP11.62□□□□□ -0.55
VTA1-203ENST00000452973 PEX2P28328 305 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 RGS4P49798 205 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 RPL26P61254 145 aaKnown RBP11.62□□□□□ -0.55
VTA1-203ENST00000452973 PHKG1Q16816 387 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 GRAMD1BQ3KR37 738 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 TMEM215Q68D42 235 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 AAGABQ6PD74 315 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 CYP2R1Q6VVX0 501 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 TPRG1Q6ZUI0 275 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 NXPE1Q8N323 547 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 MIER2Q8N344 545 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 METTL6Q8TCB7 284 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 GDPD5Q8WTR4 605 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 UCMAQ8WVF2 138 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 SLC25A23Q9BV35 468 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 B4GALT6Q9UBX8 382 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 HS3ST2Q9Y278 367 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 GRXCR1A8MXD5 290 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 TTC34A8MYJ7 566 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 DNAJA2O60884 412 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 POP4O95707 220 aaKnown RBP11.62□□□□□ -0.55
VTA1-203ENST00000452973 MLYCDO95822 493 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 EN2P19622 333 aaPredicted RBP11.62□□□□□ -0.55
VTA1-203ENST00000452973 GPX3P22352 226 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 LBX1P52954 281 aa11.62□□□□□ -0.55
VTA1-203ENST00000452973 ADARP55265 1226 aaKnown RBP11.62□□□□□ -0.55
VTA1-203ENST00000452973 ERVPABLB-1P60509 514 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms