RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 AMZ2Q86W34 360 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 TRAPPC5Q8IUR0 188 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 BEND7Q8N7W2 519 aaPredicted RBP13.06□□□□□ -0.32
HMGB3-204ENST00000448905 SIDT2Q8NBJ9 832 aaKnown RBP13.06□□□□□ -0.32
HMGB3-204ENST00000448905 THAP4Q8WY91 577 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 EID2BQ96D98 161 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 VPS35Q96QK1 796 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 TRIB3Q96RU7 358 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 TRABDQ9H4I3 376 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 LRRC4CQ9HCJ2 640 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 TRIM10Q9UDY6 481 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 RARRES3Q9UL19 164 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 TP53TG5Q9Y2B4 290 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 ZNF711Q9Y462 761 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 PCDHGA6Q9Y5G7 932 aa13.06□□□□□ -0.32
HMGB3-204ENST00000448905 MRPS18BQ9Y676 258 aaKnown RBP13.06□□□□□ -0.32
HMGB3-204ENST00000448905 DNMT3AQ9Y6K1 912 aaPredicted RBP13.06□□□□□ -0.32
HMGB3-204ENST00000448905 CDC14CA4D256 554 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 VPS4BO75351 444 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 MTX2O75431 263 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 ZNF28P17035 718 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 F8A1P23610 371 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 HMGCLP35914 325 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 CAPZBP47756 277 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 NR2C2P49116 596 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 DRG2P55039 364 aaKnown RBP13.05□□□□□ -0.32
HMGB3-204ENST00000448905 ZBTB17Q13105 803 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 GPR18Q14330 331 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 SLC18A3Q16572 532 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 TEX44Q53QW1 395 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 ATP1A1-AS1Q5TC04 95 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 RFX6Q8HWS3 928 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 EFCAB3Q8N7B9 438 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 PLD5Q8N7P1 536 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 DTX3LQ8TDB6 740 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 GLOD4Q9HC38 313 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 LHX9Q9NQ69 397 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 VPS4AQ9UN37 437 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 MAN2B2Q9Y2E5 1009 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 AHCTF1Q8WYP5 2266 aa13.05□□□□□ -0.32
HMGB3-204ENST00000448905 ARHGEF17Q96PE2 2063 aaPredicted RBP13.04□□□□□ -0.32
HMGB3-204ENST00000448905 A0A0A6YYK5 440 aaPredicted RBP13.04□□□□□ -0.32
HMGB3-204ENST00000448905 UBA6A0AVT1 1052 aaPredicted RBP13.04□□□□□ -0.32
HMGB3-204ENST00000448905 OR52A4PA6NMU1 304 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 MTSS1O43312 755 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 KIF1CO43896 1103 aaKnown RBP13.04□□□□□ -0.32
HMGB3-204ENST00000448905 PMPCBO75439 489 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 POP7O75817 140 aaKnown RBP13.04□□□□□ -0.32
HMGB3-204ENST00000448905 EPOP01588 193 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 TMEM253P0C7T8 217 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 BRAFP15056 766 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 FECHP22830 423 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 PBX1P40424 430 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 DNASE1L3Q13609 305 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 PPP2R5EQ16537 467 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 LDLRAP1Q5SW96 308 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 LRRC38Q5VT99 294 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 SLC9A4Q6AI14 798 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 ARMC6Q6NXE6 501 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 KMT5CQ86Y97 462 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 ZNF547Q8IVP9 402 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 APLFQ8IW19 511 aaPredicted RBP13.04□□□□□ -0.32
HMGB3-204ENST00000448905 SLC35G2Q8TBE7 412 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 ZFPM2Q8WW38 1151 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 ZNF514Q96K75 400 aaPredicted RBP13.04□□□□□ -0.32
HMGB3-204ENST00000448905 CD180Q99467 661 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 CEP41Q9BYV8 373 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 BPIFA1Q9NP55 256 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 DDX56Q9NY93 547 aaKnown RBP13.04□□□□□ -0.32
HMGB3-204ENST00000448905 HACD3Q9P035 362 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 FAM153AQ9UHL3 310 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 TLK1Q9UKI8 766 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 PLAAQ9Y263 795 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 SDK2Q58EX2 2172 aa13.04□□□□□ -0.32
HMGB3-204ENST00000448905 MAST4O15021 2626 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 TTLL8A6PVC2 850 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 MAP3K7O43318 606 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 AKR1B10O60218 316 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 MT-CYBP00156 380 aaPredicted RBP13.03□□□□□ -0.32
HMGB3-204ENST00000448905 KLK3P07288 261 aaPredicted RBP13.03□□□□□ -0.32
HMGB3-204ENST00000448905 TPM1P09493 284 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 HNRNPH3P31942 346 aaKnown RBP13.03□□□□□ -0.32
HMGB3-204ENST00000448905 SLC1A1P43005 524 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 PMS2P54278 862 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 HSD11B2P80365 405 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 TUBB3Q13509 450 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 TFDP2Q14188 446 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 PLCL1Q15111 1095 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 ATP13A5Q4VNC0 1218 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 TMTC4Q5T4D3 741 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 LUZP1Q86V48 1076 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 RHOT2Q8IXI1 618 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 OR8K1Q8NGG5 319 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 OR8K5Q8NH50 307 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 SPATA22Q8NHS9 363 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 RSC1A1Q92681 617 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 MIB2Q96AX9 1013 aa13.03□□□□□ -0.32
HMGB3-204ENST00000448905 TADA1Q96BN2 335 aa13.03□□□□□ -0.32
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