RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 RNF145Q96MT1 663 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SEPHS2Q99611 448 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 FUNDC2Q9BWH2 189 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 UGT2B28Q9BY64 529 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 LRRC3Q9BY71 257 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 TFB2MQ9H5Q4 396 aaKnown RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SOX17Q9H6I2 414 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 RMND5AQ9H871 391 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ARNT2Q9HBZ2 717 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ANKHQ9HCJ1 492 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SLC52A3Q9NQ40 469 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 RGS18Q9NS28 235 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 RBM22Q9NW64 420 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■■■■□ 23.9
CPSF7-206ENST00000448745 USE1Q9NZ43 259 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 DSEQ9UL01 958 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 BAG5Q9UL15 447 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 PIN4Q9Y237 131 aaKnown RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SNX10Q9Y5X0 201 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 PTPRSQ13332 1948 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 PATJQ8NI35 1801 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SMIM28A0A1B0GU29 152 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 YJEFN3A6XGL0 299 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 MEIS3P2A8K0S8 358 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ZNF99A8MXY4 864 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 H0Y858 1186 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 I6L893 689 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 AURKAO14965 403 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ZNF623O75123 536 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 JRKO75564 520 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SLC22A3O75751 556 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 RSL1D1O76021 490 aaKnown RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 BEST1O76090 585 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 CYBBP04839 570 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ALPLP05186 524 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 HLA-DQB2P05538 268 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 PRR35P0CG20 571 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 GSTT2P0CG29 244 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 GSTT2BP0CG30 244 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 CSF2RAP15509 400 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 HOXB6P17509 224 aaKnown RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 TSPAN8P19075 237 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 HRH2P25021 359 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 HOXC13P31276 330 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 IDUAP35475 653 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 POLR2JP52435 117 aaKnown RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 WNT3AP56704 352 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SH3BP2P78314 561 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SPCS2Q15005 226 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ACOX1Q15067 660 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ZIK1Q3SY52 487 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ZNF789Q5FWF6 425 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 RABL3Q5HYI8 236 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 RAB41Q5JT25 222 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 C6orf141Q5SZD1 244 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 GPR158Q5T848 1215 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 DEPDC1Q5TB30 811 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 GLYATQ6IB77 296 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 TBPL2Q6SJ96 375 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 KDELC1Q6UW63 502 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 PAQR9Q6ZVX9 377 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 CHST15Q7LFX5 561 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SLCO6A1Q86UG4 719 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ZNF598Q86UK7 904 aaKnown RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 STK32CQ86UX6 486 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ARHGAP12Q8IWW6 846 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 CHDHQ8NE62 594 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 DNAJB14Q8TBM8 379 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 GIPC2Q8TF65 315 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 ANKRD49Q8WVL7 239 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 EXT2Q93063 718 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 POP5Q969H6 163 aaKnown RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 TMBIM1Q969X1 311 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 CGREF1Q99674 301 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 YIPF2Q9BWQ6 316 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 BRINP2Q9C0B6 783 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 SLC25A51Q9H1U9 297 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 TOR3AQ9H497 397 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 NXF3Q9H4D5 531 aaKnown RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 TLR9Q9NR96 1032 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 FNIP2Q9P278 1114 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 MTRRQ9UBK8 725 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 NAALAD2Q9Y3Q0 740 aa8.34□□□□□ -1.07
CPSF7-206ENST00000448745 RANBP2P49792 3224 aaKnown RBP8.34□□□□□ -1.07
CPSF7-206ENST00000448745 COL4A6Q14031 1691 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 A0A0U1RQF3 1178 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 MAFKO60675 156 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 SNX2O60749 519 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 NDUFS2O75306 463 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 UGT2B11O75310 529 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 GABARAPO95166 117 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 KCNH1O95259 989 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 PARNO95453 639 aaKnown RBP8.33□□□□□ -1.08
CPSF7-206ENST00000448745 USP17L7P0C7H9 530 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 CHRM3P20309 590 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 CHRNA4P43681 627 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 PCYT1AP49585 367 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 SUOXP51687 545 aa8.33□□□□□ -1.08
CPSF7-206ENST00000448745 MLLT10P55197 1068 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms