RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 MAPK15Q8TD08 544 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 SGF29Q96ES7 293 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 STN1Q9H668 368 aaKnown RBP13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 VPS37BQ9H9H4 285 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 ST14Q9Y5Y6 855 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 U3KQA8 63 aa13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 CNOT1A5YKK6 2376 aaKnown RBP13.81□□□□□ -0.2
GTF3C3-206ENST00000448539 KLHL33A6NCF5 533 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 RHPN2P1A8MT19 583 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 PDZK1P1A8MUH7 402 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 F8W8V4 182 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 NOBOXO60393 691 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 PRSS56P0CW18 603 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 GLB1P16278 677 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 IDSP22304 550 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 IVDP26440 423 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 NSG1P42857 185 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 ITGA8P53708 1063 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 MAZP56270 477 aaKnown RBP13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 CALCOCO2Q13137 446 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 HLTFQ14527 1009 aaKnown RBP eCLIP13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 DBN1Q16643 649 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 BCL7AQ4VC05 210 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 CES3Q6UWW8 571 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 ZNF572Q7Z3I7 529 aaPredicted RBP13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 PIANPQ8IYJ0 282 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 PDIK1LQ8N165 341 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 MPP5Q8N3R9 675 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 GALNT15Q8N3T1 639 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 CHCHD4Q8N4Q1 142 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 MNS1Q8NEH6 495 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 MFSD3Q96ES6 412 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 SGSM3Q96HU1 749 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 SYNDIG1Q9H7V2 258 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 TREX1Q9NSU2 369 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 CATSPERZQ9NTU4 200 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 LRIT1Q9P2V4 623 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 TBC1D29Q9UFV1 150 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 SLC23A2Q9UGH3 650 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 SNX24Q9Y343 169 aa13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 UTP11Q9Y3A2 253 aaKnown RBP13.8□□□□□ -0.2
GTF3C3-206ENST00000448539 ASPMQ8IZT6 3477 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 FRYQ5TBA9 3013 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 TRBV23OR9-2A0A075B6M9 112 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 FAM237BA0A1B0GVD1 139 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 MGAT4DA6NG13 374 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 OR5K4A6NMS3 321 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 QSOX1O00391 747 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 PFDN6O15212 129 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 CD3EAPO15446 510 aaKnown RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 RAD51CO43502 376 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 NUDT21O43809 227 aaKnown RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 HYAL3O43820 417 aaPredicted RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 DKK1O94907 266 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 AP2A2O94973 939 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 SEC31AO94979 1220 aaKnown RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 VAPBO95292 243 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 F3P13726 295 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 HALP42357 657 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 PRLHRP49683 370 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 ARL4CP56559 192 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 MRPS25P82663 173 aaKnown RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 B4GALNT1Q00973 533 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 SEPT7Q16181 437 aaKnown RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 ST3GAL2Q16842 350 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 BBS9Q3SYG4 887 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 MRNIPQ6NTE8 343 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 HIBCHQ6NVY1 386 aaPredicted RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 IYDQ6PHW0 289 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 RAB44Q7Z6P3 723 aaPredicted RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 C11orf96Q7Z7L8 435 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 SLC9B2Q86UD5 537 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 NAGSQ8N159 534 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 ARL14Q8N4G2 192 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 AVL9Q8NBF6 648 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 CCDC74AQ96AQ1 378 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 ZNF669Q96BR6 464 aaPredicted RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 STAMBPL1Q96FJ0 436 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 ERP44Q9BS26 406 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 RAB17Q9H0T7 212 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 PRDM8Q9NQV8 689 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 MRFAP1Q9Y605 127 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 RPS6KL1Q9Y6S9 549 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 WDFY3Q8IZQ1 3526 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 ARID1BQ8NFD5 2236 aaPredicted RBP13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 ACACBO00763 2458 aa13.79□□□□□ -0.2
GTF3C3-206ENST00000448539 ZNF106Q9H2Y7 1883 aaKnown RBP13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 IGLV3-16A0A075B6K0 115 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 KIR2DS5A0A0G2JLQ3 304 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 A0A0G2JNG1 304 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 KIR2DS3K7RE56 304 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 NDUFS3O75489 264 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 USP1O94782 785 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 POLBP06746 335 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 JUPP14923 745 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 PNLIPP16233 465 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 MAGEA3P43357 314 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 PPM1FP49593 454 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms