RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 WASF3Q9UPY6 502 aa13.16□□□□□ -0.3
SNHG4-201ENST00000448190 PCDHGA1Q9Y5H4 931 aa13.16□□□□□ -0.3
SNHG4-201ENST00000448190 MAD1L1Q9Y6D9 718 aa13.16□□□□□ -0.3
SNHG4-201ENST00000448190 TRBV5-4A0A0C4DH59 114 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 RHPN2P1A8MT19 583 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 PDZK1P1A8MUH7 402 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 GPR89AB7ZAQ6 455 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 AP3B1O00203 1094 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 AGRPO00253 132 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 RAD51CO43502 376 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 B4GAT1O43505 415 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 VAPBO95292 243 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 GPR89BP0CG08 455 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 RALBP11234 206 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 ALDH4A1P30038 563 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 OR1D5P58170 312 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 E2F1Q01094 437 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 ACVR1Q04771 509 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 TARDBPQ13148 414 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNHG4-201ENST00000448190 NFE2L1Q14494 772 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 AMZ1Q400G9 498 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 MSS51Q4VC12 460 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 FASTKD1Q53R41 847 aaKnown RBP13.15□□□□□ -0.3
SNHG4-201ENST00000448190 HES3Q5TGS1 186 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 NAPRTQ6XQN6 538 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 SYDE1Q6ZW31 735 aaPredicted RBP13.15□□□□□ -0.3
SNHG4-201ENST00000448190 CFAP206Q8IYR0 622 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 LILRA3Q8N6C8 439 aaPredicted RBP13.15□□□□□ -0.3
SNHG4-201ENST00000448190 OTUD6BQ8N6M0 293 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 SIGLEC10Q96LC7 697 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 RUNDC3BQ96NL0 473 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 DPH5Q9H2P9 285 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
SNHG4-201ENST00000448190 TREX1Q9NSU2 369 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 EVA1BQ9NVM1 165 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 CDC23Q9UJX2 597 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 ANAPC5Q9UJX4 755 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 RIMKLBQ9ULI2 386 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 SOX13Q9UN79 622 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 WDR37Q9Y2I8 494 aa13.15□□□□□ -0.3
SNHG4-201ENST00000448190 CACNA1AO00555 2505 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 PCNX2A6NKB5 2137 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 EFCAB8A8MWE9 144 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 CFAP99D6REC4 459 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 CD3EAPO15446 510 aaKnown RBP13.14□□□□□ -0.31
SNHG4-201ENST00000448190 MT-CO3P00414 261 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 F7P08709 466 aaPredicted RBP13.14□□□□□ -0.31
SNHG4-201ENST00000448190 MLNP12872 115 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 GLB1P16278 677 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 ITGB6P18564 788 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 IDSP22304 550 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
SNHG4-201ENST00000448190 PPM1FP49593 454 aaPredicted RBP13.14□□□□□ -0.31
SNHG4-201ENST00000448190 ITGA8P53708 1063 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 ILKQ13418 452 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 DHX34Q14147 1143 aaKnown RBP13.14□□□□□ -0.31
SNHG4-201ENST00000448190 CLCA4Q14CN2 919 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 BBS9Q3SYG4 887 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 ANKRD20A4Q4UJ75 823 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 NKAIN2Q5VXU1 208 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 USP53Q70EK8 1073 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 TMPRSS7Q7RTY8 843 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 PCGF5Q86SE9 256 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 C17orf82Q86X59 251 aaPredicted RBP13.14□□□□□ -0.31
SNHG4-201ENST00000448190 IGDCC3Q8IVU1 814 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 SLC37A2Q8TED4 501 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 C19orf43Q9BQ61 176 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 TIMM29Q9BSF4 260 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 SAMD15Q9P1V8 674 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 ANGPTL2Q9UKU9 493 aa13.14□□□□□ -0.31
SNHG4-201ENST00000448190 ATXN7L1Q9ULK2 861 aaPredicted RBP13.14□□□□□ -0.31
SNHG4-201ENST00000448190 A6NCN8 305 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 OR52A4PA6NMU1 304 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 RPLP0P05388 317 aaKnown RBP13.13□□□□□ -0.31
SNHG4-201ENST00000448190 GP1BAP07359 652 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 BRAFP15056 766 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 VCLP18206 1134 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 ARNTP27540 789 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 DHX9Q08211 1270 aaKnown RBP13.13□□□□□ -0.31
SNHG4-201ENST00000448190 BRD3Q15059 726 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 TRADDQ15628 312 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 UNC5BQ8IZJ1 945 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 SFRP1Q8N474 314 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 NAT6Q93015 286 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 ZNF669Q96BR6 464 aaPredicted RBP13.13□□□□□ -0.31
SNHG4-201ENST00000448190 SNF8Q96H20 258 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 CCM2Q9BSQ5 444 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 CATSPERZQ9NTU4 200 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 ZNF624Q9P2J8 865 aaPredicted RBP13.13□□□□□ -0.31
SNHG4-201ENST00000448190 CFAP20Q9Y6A4 193 aaKnown RBP13.13□□□□□ -0.31
SNHG4-201ENST00000448190 DNMT3AQ9Y6K1 912 aaPredicted RBP13.13□□□□□ -0.31
SNHG4-201ENST00000448190 RPS6KL1Q9Y6S9 549 aa13.13□□□□□ -0.31
SNHG4-201ENST00000448190 TDRD6O60522 2096 aaKnown RBP13.12□□□□□ -0.31
SNHG4-201ENST00000448190 IGLV3-16A0A075B6K0 115 aa13.12□□□□□ -0.31
SNHG4-201ENST00000448190 A0A1W2PQM1 296 aa13.12□□□□□ -0.31
SNHG4-201ENST00000448190 MAGEB16A2A368 324 aa13.12□□□□□ -0.31
SNHG4-201ENST00000448190 MGAT4DA6NG13 374 aa13.12□□□□□ -0.31
SNHG4-201ENST00000448190 IQCF5A8MTL0 148 aa13.12□□□□□ -0.31
SNHG4-201ENST00000448190 NUDT21O43809 227 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms