RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 CST3P01034 146 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-204ENST00000448183 AP3S2P59780 193 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 SWI5Q1ZZU3 235 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 ZDHHC20Q5W0Z9 365 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 CRYBG2Q8N1P7 616 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF433Q8N7K0 673 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-204ENST00000448183 SLC38A4Q969I6 547 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 SKA1Q96BD8 255 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 B3GALT6Q96L58 329 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF354BQ96LW1 612 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 AIF1LQ9BQI0 150 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 NUSAP1Q9BXS6 441 aaKnown RBP7.71□□□□□ -1.17
NEDD9-204ENST00000448183 SLC25A51Q9H1U9 297 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 CLEC4AQ9UMR7 237 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 SLC27A5Q9Y2P5 690 aa7.71□□□□□ -1.17
NEDD9-204ENST00000448183 MROH1Q8NDA8 1641 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 GLYATL1P3A0A0U1RQE8 302 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 WTIPA6NIX2 430 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 OR6C75A6NL08 312 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 H3BNH8 94 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 KERAO60938 352 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 SCN2BO60939 215 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 REM1O75628 298 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 RPLP0P05388 317 aaKnown RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 CD48P09326 243 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 PRPS2P11908 318 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 RHOQP17081 205 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 PTX3P26022 381 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 SLC7A1P30825 629 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 CDH4P55283 916 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 POM121L1PQ3SYA9 428 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 RNASE12Q5GAN4 147 aaKnown RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 OGFOD2Q6N063 350 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 TMPRSS11BQ86T26 416 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 DCBLD1Q8N8Z6 715 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 OR52J3Q8NH60 311 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 OR10A6Q8NH74 314 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 KBTBD7Q8WVZ9 684 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 LPPQ93052 612 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 EMID1Q96A84 441 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF558Q96NG5 402 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 GLIS2Q9BZE0 524 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 ASAH2Q9NR71 780 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 NOCTQ9UK39 431 aaKnown RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 MRPS33Q9Y291 106 aaKnown RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 SLC27A6Q9Y2P4 619 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 AQP12BA6NM10 295 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF99A8MXY4 864 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 MCIDASD6RGH6 385 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 TPD52L2O43399 206 aaKnown RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 ANXA4P09525 319 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 RAP2AP10114 183 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 LAMP2P13473 410 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 S100GP29377 79 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 HSPA7P48741 367 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 ARHGDIBP52566 201 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 C2orf80Q0P641 193 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 ZDHHC24Q6UX98 284 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 ABHD15Q6UXT9 468 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 ZDHHC21Q8IVQ6 265 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 AQP12AQ8IXF9 295 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 RAVER1Q8IY67 606 aaKnown RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 GJD3Q8N144 294 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 ZBTB2Q8N680 514 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 MAB21L3Q8N8X9 362 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 TNFAIP8L1Q8WVP5 186 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 COPS4Q9BT78 406 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 FAM124BQ9H5Z6 455 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-204ENST00000448183 SOHLH2Q9NX45 425 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 IKZF2Q9UKS7 526 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 PCDHGB3Q9Y5G1 929 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 GRIN2DO15399 1336 aa7.71□□□□□ -1.18
NEDD9-204ENST00000448183 PIP5K1BO14986 540 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 MSI1O43347 362 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 IL1BP01584 269 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ELFN1P0C7U0 828 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 SAGP10523 405 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 NCK1P16333 377 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ATF6P18850 670 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ITGA3P26006 1051 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 L1CAMP32004 1257 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ARFIP1P53367 373 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 PCDH1Q08174 1060 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CXorf57Q6NSI4 855 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ESRP1Q6NXG1 681 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 LDB1Q86U70 411 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 UNC5BQ8IZJ1 945 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 GLB1L3Q8NCI6 653 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 SPPL2BQ8TCT7 592 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 RASSF5Q8WWW0 418 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 NECTIN3Q9NQS3 549 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 MAP10Q9P2G4 905 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CKLFQ9UBR5 152 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 DNAJB9Q9UBS3 223 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 GPSM3Q9Y4H4 160 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TLL2Q9Y6L7 1015 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CXCR6O00574 342 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TBX1O43435 398 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 DDNO94850 711 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 OR4F21O95013 312 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms