RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 PMPCAQ10713 525 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 BFSP1Q12934 665 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 ITGADQ13349 1161 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 CAMK2DQ13557 499 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 SNTB1Q13884 538 aaKnown RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 TCTN1Q2MV58 587 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 KLHL40Q2TBA0 621 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 ZNF790Q6PG37 636 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 CWC27Q6UX04 472 aaKnown RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 HAPLN4Q86UW8 402 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 AACSQ86V21 672 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 TMC8Q8IU68 726 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 CREBRFQ8IUR6 639 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 CCDC13Q8IYE1 715 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 FAM185AQ8N0U4 392 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 TMEM199Q8N511 208 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 HJURPQ8NCD3 748 aaPredicted RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 MSANTD4Q8NCY6 345 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 GJC3Q8NFK1 279 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 DUSP19Q8WTR2 217 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 PTERQ96BW5 349 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 RNF183Q96D59 192 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 MSI2Q96DH6 328 aaKnown RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 RAB3IPQ96QF0 476 aaPredicted RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 GAD1Q99259 594 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 SEPT5Q99719 369 aaPredicted RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 MXRA8Q9BRK3 442 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 C1QTNF5Q9BXJ0 243 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 UPF3BQ9BZI7 483 aaKnown RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 TKTL2Q9H0I9 626 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 MAGEE1Q9HCI5 957 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 WDR6Q9NNW5 1121 aaKnown RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 ECHDC1Q9NTX5 307 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 PSD3Q9NYI0 1048 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 WSB2Q9NYS7 404 aaPredicted RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 PLEKHB1Q9UF11 243 aaPredicted RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 AMACRQ9UHK6 382 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 ANAPC2Q9UJX6 822 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 ISY1Q9ULR0 285 aaKnown RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 PCDHA12Q9UN75 941 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 PA2G4Q9UQ80 394 aaKnown RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 SNX5Q9Y5X3 404 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 MAU2Q9Y6X3 613 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 NPHP3Q7Z494 1330 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 RAD50Q92878 1312 aa4.17□□□□□ -1.74
VPS29-202ENST00000447578 USP42Q9H9J4 1324 aaKnown RBP4.17□□□□□ -1.74
VPS29-202ENST00000447578 LMO7Q8WWI1 1683 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 TMEM94Q12767 1356 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 HEG1Q9ULI3 1381 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 KDM6AO15550 1401 aaPredicted RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 C17orf102A2RUQ5 167 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 H0Y626 953 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 PAPSS1O43252 624 aaPredicted RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 TLX3O43711 291 aaPredicted RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 UGDHO60701 494 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 DIAPH2O60879 1101 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 NEURL1O76050 574 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 MTA2O94776 668 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 SLU7O95391 586 aaKnown RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 ATP5BP06576 529 aaKnown RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 TPOP07202 933 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 TGFB3P10600 412 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 ACTN1P12814 892 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 HOXB2P14652 356 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 ARRB2P32121 409 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 SHMT1P34896 483 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 SLC16A2P36021 539 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 GPR12P47775 334 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 ALDH7A1P49419 539 aaKnown RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 RBP5P82980 135 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 SORDQ00796 357 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 GRAPQ13588 217 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 ALCAMQ13740 583 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 KCNC3Q14003 757 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 CRY2Q49AN0 593 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 ALG10Q5BKT4 473 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 ALG10BQ5I7T1 473 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 CAVIN1Q6NZI2 390 aaKnown RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 FBXO46Q6PJ61 603 aaPredicted RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 DCLRE1AQ6PJP8 1040 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 LCTLQ6UWM7 567 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 LRIG3Q6UXM1 1119 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 CFAP77Q6ZQR2 320 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 COPS6Q7L5N1 327 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 METTL23Q86XA0 190 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 ADGRF4Q8IZF3 695 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 TTC5Q8N0Z6 440 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 DPP10Q8N608 796 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 CMASQ8NFW8 434 aaPredicted RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 OR14L1PQ8NHC6 308 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 MOAP1Q96BY2 351 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 HARBI1Q96MB7 349 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 DGAT2Q96PD7 388 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 TMEM47Q9BQJ4 181 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 LSG1Q9H089 658 aaKnown RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 CDT1Q9H211 546 aa4.16□□□□□ -1.74
VPS29-202ENST00000447578 BICC1Q9H694 974 aaKnown RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 MOV10Q9HCE1 1003 aaKnown RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 RRAGDQ9NQL2 400 aaPredicted RBP4.16□□□□□ -1.74
VPS29-202ENST00000447578 SELENONQ9NZV5 590 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms