RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 IGFLR1Q9H665 355 aa9.41□□□□□ -0.9
COL6A4P1-201ENST00000446690 AKTIPQ9H8T0 292 aa9.41□□□□□ -0.9
COL6A4P1-201ENST00000446690 EBF2Q9HAK2 575 aa9.41□□□□□ -0.9
COL6A4P1-201ENST00000446690 EIF2B4Q9UI10 523 aaKnown RBP9.41□□□□□ -0.9
COL6A4P1-201ENST00000446690 CDH22Q9UJ99 828 aa9.41□□□□□ -0.9
COL6A4P1-201ENST00000446690 ASB1Q9Y576 335 aa9.41□□□□□ -0.9
COL6A4P1-201ENST00000446690 MYO7AQ13402 2215 aa9.41□□□□□ -0.9
COL6A4P1-201ENST00000446690 PSMD12O00232 456 aaPredicted RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 S100BP04271 92 aaPredicted RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 FGF4P08620 206 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 C1SP09871 688 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 ADH5P11766 374 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 XPAP23025 273 aaPredicted RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 RPS3P23396 243 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 RGS4P49798 205 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 FASTKQ14296 549 aaKnown RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 KIF19Q2TAC6 998 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 TRMT5Q32P41 509 aaKnown RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 MMEL1Q495T6 779 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 TXNDC11Q6PKC3 985 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 C12orf40Q86WS4 652 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 FBXW8Q8N3Y1 598 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 ZBTB2Q8N680 514 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 ENDOVQ8N8Q3 282 aaKnown RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 TUBGCP3Q96CW5 907 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 OTUB2Q96DC9 234 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 RSPRY1Q96DX4 576 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 CDK15Q96Q40 435 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 COPS8Q99627 209 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 EBF3Q9H4W6 596 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 EFCAB1Q9HAE3 211 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 LATS2Q9NRM7 1088 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 TRBV5-4A0A0C4DH59 114 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 CXorf51AA0A1B0GTR3 108 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 SOBPA7XYQ1 873 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 STX16-NPEPL1H3BU86 382 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 STX16O14662 325 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 SLC22A2O15244 555 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 BAG2O95816 211 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 CYP17A1P05093 508 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 DGKAP23743 735 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 ADSLP30566 484 aaPredicted RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 PBX2P40425 430 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 NSG1P42857 185 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 PTDSS1P48651 473 aaKnown RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 SPINT3P49223 89 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 INHBCP55103 352 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 ACTR3P61158 418 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 KANK2Q63ZY3 851 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 C16orf89Q6UX73 402 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 CYHR1Q6ZMK1 362 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 LARP4Q71RC2 724 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 SYVN1Q86TM6 617 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 FRS2Q8WU20 508 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 OSCP1Q8WVF1 389 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 SKA2Q8WVK7 121 aaPredicted RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 STON2Q8WXE9 905 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 ATP6V1E2Q96A05 226 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 ERLEC1Q96DZ1 483 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 MRGPRX3Q96LB0 322 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 CDRT15Q96T59 188 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 EGFL8Q99944 293 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 HTATIP2Q9BUP3 242 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 MRPL1Q9BYD6 325 aaKnown RBP9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 SLC2A11Q9BYW1 496 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 TUBB1Q9H4B7 451 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 IL36AQ9UHA7 158 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 PCTPQ9UKL6 214 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 ADAMTS6Q9UKP5 1117 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 PPIL1Q9Y3C6 166 aa9.4□□□□□ -0.9
COL6A4P1-201ENST00000446690 MYOFQ9NZM1 2061 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 E2F3O00716 465 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 FFAR2O15552 330 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 KLK8O60259 260 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 TBX10O75333 385 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 MTX2O75431 263 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 MLYCDO95822 493 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 RPS17P08708 135 aaKnown RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 GNAZP19086 355 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 AKT1P31749 480 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 MSX2P35548 267 aaPredicted RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 SLC6A11P48066 632 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 STX1BP61266 288 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 ST8SIA6P61647 398 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 GRB7Q14451 532 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 SQLEQ14534 574 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 SHHQ15465 462 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 FAM78AQ5JUQ0 283 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PDE12Q6L8Q7 609 aaKnown RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 BRAT1Q6PJG6 821 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PAOXQ6QHF9 649 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 MACC1Q6ZN28 852 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 CHSY3Q70JA7 882 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 RNF148Q8N7C7 305 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 OR56A4Q8NGH8 313 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF483Q8TF39 744 aaPredicted RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 SCAMP4Q969E2 229 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PLEKHG4BQ96PX9 1271 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 MCCC1Q96RQ3 725 aaPredicted RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 NOL11Q9H8H0 719 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms