RNA–Protein interactions for RNA: ENST00000446547.5

RAB5A-205, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5A, Length 1,358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-205ENST00000446547 IGFL4Q6B9Z1 124 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 CAPRIN2Q6IMN6 1127 aaKnown RBP4.99□□□□□ -1.61
RAB5A-205ENST00000446547 TMCO3Q6UWJ1 677 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 VSTM1Q6UX27 236 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 RTL10Q7L3V2 364 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 ENOSF1Q7L5Y1 443 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 TFAP2DQ7Z6R9 452 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 RFX6Q8HWS3 928 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 RHPN2Q8IUC4 686 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 UBALD2Q8IYN6 164 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 ULK2Q8IYT8 1036 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 CEP57L1Q8IYX8 460 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 CEP112Q8N8E3 955 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 SETD9Q8NE22 299 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 VN1R2Q8NFZ6 395 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 TRIM58Q8NG06 486 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 SPDL1Q96EA4 605 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 PERPQ96FX8 193 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 HIC2Q96JB3 615 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 KLHL15Q96M94 604 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 ZMAT2Q96NC0 199 aaKnown RBP4.99□□□□□ -1.61
RAB5A-205ENST00000446547 PIP5K1AQ99755 562 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 PARD6BQ9BYG5 372 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 FTOQ9C0B1 505 aaKnown RBP eCLIP4.99□□□□□ -1.61
RAB5A-205ENST00000446547 ANKEF1Q9NU02 776 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 PDRG1Q9NUG6 133 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 GAR1Q9NY12 217 aaKnown RBP4.99□□□□□ -1.61
RAB5A-205ENST00000446547 SH3BP4Q9P0V3 963 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 DLGAP2Q9P1A6 1054 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 ING1Q9UK53 422 aaPredicted RBP4.99□□□□□ -1.61
RAB5A-205ENST00000446547 TMCO1Q9UM00 188 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 ZNF148Q9UQR1 794 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 HS3ST3A1Q9Y663 406 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 NOTCH2Q04721 2471 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 DLG5Q8TDM6 1919 aa4.99□□□□□ -1.61
RAB5A-205ENST00000446547 UTP20O75691 2785 aaKnown RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 ATMQ13315 3056 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 NLRC5Q86WI3 1866 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 KAT6AQ92794 2004 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 TMEM8BA6NDV4 472 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 C2CD4DB7Z1M9 353 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 GCOM1H8Y6P7 765 aaPredicted RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 STRNO43815 780 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 TMCC2O75069 709 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 FGFR1OPO95684 399 aaKnown RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 SNAI1O95863 264 aaPredicted RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 CHRM4P08173 479 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 IQCF3P0C7M6 154 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 LINC00271P0C7V0 271 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 LAMP2P13473 410 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 NFKBIAP25963 317 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 OAS2P29728 719 aaKnown RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 CA8P35219 290 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 GJC1P36383 396 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 CCR10P46092 362 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 CPA2P48052 419 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 LMAN1P49257 510 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 OAZ1P54368 228 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 CCNA1P78396 465 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 SIM1P81133 766 aaPredicted RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 SMC1AQ14683 1233 aaKnown RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 MED22Q15528 200 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 PFKFB3Q16875 520 aaPredicted RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 SMUG1Q53HV7 270 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 C20orf194Q5TEA3 1177 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 MIS18BP1Q6P0N0 1132 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 CEP85Q6P2H3 762 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 KLHL24Q6TFL4 600 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 IKBIPQ70UQ0 350 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 GALNT5Q7Z7M9 940 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 GHDCQ8N2G8 530 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 LRRC43Q8N309 656 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 SPC24Q8NBT2 197 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 SUN5Q8TC36 379 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 HSPH1Q92598 858 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 GTF3C6Q969F1 213 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 CGREF1Q99674 301 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 CADM1Q9BY67 442 aaKnown RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 NACAP1Q9BZK3 213 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 UPF3AQ9H1J1 476 aaKnown RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 TNMDQ9H2S6 317 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 PAPOLBQ9NRJ5 636 aaKnown RBP4.98□□□□□ -1.61
RAB5A-205ENST00000446547 NSMCE4AQ9NXX6 385 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 DTX4Q9Y2E6 619 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 SIPA1L1O43166 1804 aa4.98□□□□□ -1.61
RAB5A-205ENST00000446547 CSMD1Q96PZ7 3565 aa4.97□□□□□ -1.61
RAB5A-205ENST00000446547 GRID2IPA4D2P6 1211 aa4.97□□□□□ -1.61
RAB5A-205ENST00000446547 EIF4E1BA6NMX2 242 aaKnown RBP4.97□□□□□ -1.61
RAB5A-205ENST00000446547 PTGES3LE9PB15 166 aa4.97□□□□□ -1.61
RAB5A-205ENST00000446547 GTPBP1O00178 669 aaKnown RBP4.97□□□□□ -1.61
RAB5A-205ENST00000446547 RRHO14718 337 aa4.97□□□□□ -1.61
RAB5A-205ENST00000446547 LDLRAD4O15165 306 aa4.97□□□□□ -1.61
RAB5A-205ENST00000446547 WDR46O15213 610 aaKnown RBP4.97□□□□□ -1.61
RAB5A-205ENST00000446547 BIRC5O15392 142 aa4.97□□□□□ -1.61
RAB5A-205ENST00000446547 HBP1O60381 514 aa4.97□□□□□ -1.61
RAB5A-205ENST00000446547 DUSP11O75319 330 aaKnown RBP4.97□□□□□ -1.61
RAB5A-205ENST00000446547 TACC1O75410 805 aa4.97□□□□□ -1.61
RAB5A-205ENST00000446547 IGKV5-2P06315 115 aa4.97□□□□□ -1.61
RAB5A-205ENST00000446547 DCNP07585 359 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms