RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 HAVCR1Q96D42 359 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 C1orf50Q9BV19 199 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 TDP1Q9NUW8 608 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 PSMD13Q9UNM6 376 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SCN2BO60939 215 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 NOL4O94818 638 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 DLGAP3O95886 979 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 CFIP05156 583 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ALDH4A1P30038 563 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 MAXP61244 160 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 FUT2Q10981 343 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 GCNT6Q5T4J0 391 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 CRYBG2Q8N1P7 616 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 CDYL2Q8N8U2 506 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SLC43A3Q8NBI5 491 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 KLHL6Q8WZ60 621 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 LMLNQ96KR4 655 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 KLHL32Q96NJ5 620 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 BRINP2Q9C0B6 783 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 REXO4Q9GZR2 422 aaKnown RBP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 MCCC2Q9HCC0 563 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SCML1Q9UN30 329 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.47□□□□□ -1.05
PTPN3-204ENST00000446349 INPPL1O15357 1258 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 NPNTQ6UXI9 565 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SLC29A4Q7RTT9 530 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 OR8H2Q8N162 312 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ADCY4Q8NFM4 1077 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 TRAPPC9Q96Q05 1148 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 LGMNQ99538 433 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ZDHHC3Q9NYG2 299 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 SERTAD3Q9UJW9 196 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 ACSL5Q9ULC5 683 aa8.47□□□□□ -1.05
PTPN3-204ENST00000446349 IGLV3-22A0A075B6J6 115 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 NFKBIEO00221 500 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 CHRNA1P02708 482 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 MLLT3P42568 568 aaPredicted RBP8.46□□□□□ -1.05
PTPN3-204ENST00000446349 SLC7A2P52569 658 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 CASP6P55212 293 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 IRGCQ6NXR0 463 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 GCNT7Q6ZNI0 430 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 CPNE9Q8IYJ1 553 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 KIF2BQ8N4N8 673 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 OXR1Q8N573 874 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 GPR156Q8NFN8 814 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 HIST1H2AAQ96QV6 131 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF717Q9BY31 904 aaPredicted RBP8.46□□□□□ -1.05
PTPN3-204ENST00000446349 SAGE1Q9NXZ1 904 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 ATXN10Q9UBB4 475 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 A0A1W2PQ45 241 aaPredicted RBP8.46□□□□□ -1.05
PTPN3-204ENST00000446349 A0A1W2PQY0 241 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 KPNA4O00629 521 aaPredicted RBP8.46□□□□□ -1.05
PTPN3-204ENST00000446349 VIPR1P32241 457 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 HNF4AP41235 474 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 SEC24CP53992 1094 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 RPL7AP62424 266 aaKnown RBP8.46□□□□□ -1.05
PTPN3-204ENST00000446349 RASGEF1BQ0VAM2 473 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 DLG2Q15700 870 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 SDHAF4Q5VUM1 108 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 LIX1Q8N485 282 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 LNX1Q8TBB1 728 aaPredicted RBP8.46□□□□□ -1.05
PTPN3-204ENST00000446349 FOXJ1Q92949 421 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 EXOC2Q96KP1 924 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 CPXM1Q96SM3 734 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 TRIM2Q9C040 744 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 NUP98P52948 1817 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 PLK4O00444 970 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 KMOO15229 486 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 OR10H3O60404 316 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 UGT2B11O75310 529 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 MYBPC1Q00872 1141 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 KIAA0930Q6ICG6 404 aaPredicted RBP8.46□□□□□ -1.05
PTPN3-204ENST00000446349 MBOAT1Q6ZNC8 495 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 TNS4Q8IZW8 715 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 TMEM125Q96AQ2 219 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 KCTD15Q96SI1 283 aaPredicted RBP8.46□□□□□ -1.05
PTPN3-204ENST00000446349 SSU72Q9NP77 194 aaKnown RBP8.46□□□□□ -1.05
PTPN3-204ENST00000446349 SH3GLB1Q9Y371 365 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 COQ4Q9Y3A0 265 aa8.46□□□□□ -1.05
PTPN3-204ENST00000446349 TMX2-CTNND1H3BSU7 103 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 NTRK1P04629 796 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 CD63P08962 238 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 CAPGP40121 348 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 DHPSP49366 369 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 SPIBQ01892 262 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 DMPKQ09013 629 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 MAPK11Q15759 364 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 SLC10A6Q3KNW5 377 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 OTUD3Q5T2D3 398 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 TSTD2Q5T7W7 516 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 RNASEH2BQ5TBB1 312 aaKnown RBP8.46□□□□□ -1.06
PTPN3-204ENST00000446349 EMC10Q5UCC4 262 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 RASGEF1CQ8N431 466 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ZNF461Q8TAF7 563 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 ENKURQ8TC29 256 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 UBE2QL1A1L167 161 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 FGF18O76093 207 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 SLC10A3P09131 477 aa8.46□□□□□ -1.06
PTPN3-204ENST00000446349 C2orf80Q0P641 193 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms